Polynucleobacter yangtzensis: PKF023_07150
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Entry
PKF023_07150 CDS
T08788
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt03030
DNA replication
pyt03430
Mismatch repair
pyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKF023_07150
03430 Mismatch repair
PKF023_07150
03440 Homologous recombination
PKF023_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyt03032
]
PKF023_07150
03400 DNA repair and recombination proteins [BR:
pyt03400
]
PKF023_07150
Enzymes [BR:
pyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKF023_07150
DNA replication proteins [BR:
pyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKF023_07150
DNA repair and recombination proteins [BR:
pyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKF023_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_22
AAA_5
AAA_30
AAA_18
AAA_24
AAA_19
nSTAND3
AAA_2
TsaE
AAA_assoc_2
Mg_chelatase
Glyco_tranf_2_5
SKI
NTPase_1
T2SSE
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
BDT76912
UniProt:
A0A9C7CLS3
LinkDB
All DBs
Position
699866..701533
Genome browser
AA seq
555 aa
AA seq
DB search
MTALALARSWRPKTFSELVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGSDGSGKMTSEPCGKCPACMEIDAGRFVDYIEMDAASNRGVDDIAALLEKAAYAP
SNGRYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLASEKVEYEVNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDCLIAKDGASLLSVANEMGERSMSFSLALQDLSSLLQKIAAA
QVVPESVLDDWPEAVEIRRLATQLTKEEAQLFYQITITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGNGGGGSSSPAPSSPSAPPVNTARPAPAAPISRTAAPAPAAKPASPAPSVVASAP
VAATGNSAERPDWHALMRQLPVKGLVQQLAFQTELQDWNDSAAGVRATIVTPMPQLASEA
SVGRLCDALTAHFGKPVKIVIEKGEVEGKTVAKVDAQIHQEKRMNAEQMIAADPFIQQLE
KEFGAKVVGGSVKPL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggcattggcccgttcgtggcgccccaaaaccttctctgaattagtcggc
caagaccatgtggttaaggctttaacccatgctttggatcagggtcgcctgcaccatgca
tggttatttacgggtacccgtggggtaggtaagaccaccatagcccgaattatggccaaa
gccctcaattgcacgggatccgatggttctggcaagatgacttcagagccttgcggaaaa
tgcccagcctgcatggaaatcgacgctggtcgctttgttgactatatcgagatggatgcc
gcaagtaatcgtggtgttgacgatattgctgcgcttctagaaaaagctgcttacgcacca
agcaatggtcgttataaggtctacatgatcgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgcttaaaactttggaagaacctccagagcacgtcaaatttattttggct
acaaccgatccccaaaaaatcccggtaactattttgtcgcgttgcttacagttcaatctc
aagcaaatgcctgtaccgctcatcgttgagcatctagaaaaagtacttgcctcagaaaaa
gtcgaatatgaagtcaatgccttacgtgtcttagctaaggcggctcaaggctctatgcgt
gatgccttgtcactcacagaccaagctattgcttatgccgctggcaaggtgactgaagag
tctgtgcgcggcatgcttggcacattagacgacgcttatctcattcgcattctggattgc
ttgattgctaaagatggtgcaagccttctctctgttgcaaatgaaatgggcgagcgcagc
atgtctttctcattggcgttgcaagatctctccagcttgttgcaaaagattgcagcagcg
caagttgttccagagtctgtattggatgattggccagaagcagtcgaaattcgtcgcttg
gccactcaattaacaaaagaagaagcgcaactcttttatcaaattacgattactagtcgc
ccagatttatcacttgcaccagatgagcaaactggttttgccatgacgcttttgcgcatg
ttggcgtttcgtccgggtaatggtggagggggtagttcatctccagccccctcatcacct
tcagccccaccagtaaatacggctcgtcctgcacccgctgcaccaatatccagaacggct
gctcctgcgcctgcagcaaaacctgcttctccagcaccatcagttgttgcttcagccccg
gttgctgctacaggtaactcagcagaacgtcccgattggcatgcattgatgcgtcagctg
ccagttaaaggcttggtgcagcagttggcatttcagacagagttacaagattggaatgat
tcagcggctggagtgcgtgcaacgattgtgacgccaatgccgcagttagcttctgaggcc
tctgttggtcgtttatgcgatgcactgactgcacactttggtaagccagtgaagatcgtg
attgaaaaaggtgaagtagagggcaagaccgttgctaaggttgatgcccagattcatcaa
gagaaaagaatgaatgctgaacaaatgattgcggctgatccttttattcagcaattagaa
aaagagtttggtgccaaggtggttggtggctcagtaaagccactttaa
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