Polynucleobacter yangtzensis: PKF023_16280
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Entry
PKF023_16280 CDS
T08788
Symbol
glcD
Name
(GenBank) glycolate oxidase
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
pyt
Polynucleobacter yangtzensis
Pathway
pyt00630
Glyoxylate and dicarboxylate metabolism
pyt01100
Metabolic pathways
pyt01110
Biosynthesis of secondary metabolites
pyt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKF023_16280 (glcD)
Enzymes [BR:
pyt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
PKF023_16280 (glcD)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BDT77825
UniProt:
A0A9C7CEK6
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Position
1689408..1690922
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AA seq
504 aa
AA seq
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MAKMILMNMVTPPPELAAISALQSKLVSALRPILPEYALLWEPEDTIPYECDGLAAYRRM
PLAVALPETEEQVAQILKICYAMQIPVVPRGSGTGLSGGAMPLSQGLVLSLAKLKKIISI
DPFTRTAVVQPGVRNLAISEAVAHLGLYYAPDPSSQIACSIGGNVNENSGGVHCLKYGLT
LHNVLRVRGILMNGEIVEFGGLAPDAPGLDLLAIMMGSEGMLAVVTEVTVKLVAKPKLAR
VIMASFDDIEKGGNAVAAIIAAGIIPAGLEMMDKATTRAVEEFVHAGYDLDAAAILLCES
DGTPEEVAEEIERMTKVLEQAGASGIQISKDESERLKFWSGRKNAFPAAGRLAPDYYCMD
GTIPRRHIATLLKRIQGMEEKYGLGCLNVFHAGDGNMHPLILFNGADQEEWHRAEEFGTE
ILEACVELGGTITGEHGVGIEKINSMCVQFGEGERESFWGVKSAFDPEKLLNPDKAIPTL
NRCAEYGRMRISGGQLPHPELERF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatgattcttatgaatatggtgaccccaccccccgaattagccgctattagc
gcccttcagtccaaattggtttcggctttgcgcccaatccttccggaatatgcccttcta
tgggagccagaagacactattccctatgagtgtgatggtctggccgcttatagaagaatg
cctttggcagtagctttgccagaaaccgaggagcaagtagcccagattttgaagatttgc
tatgcaatgcaaattcctgttgtgcctcgaggatctggaactggcctctcgggaggtgca
atgcccctttctcaaggattggtgctgtcattagccaagcttaagaaaattatcagcatt
gatccttttactcgcactgcagttgttcaacctggtgttcgcaatcttgccatttctgaa
gcagttgcacaccttggcttgtattacgcaccagacccttcttcgcaaattgcctgctct
attggcggcaacgtgaatgaaaactccggtggcgtgcactgcctcaaatatggcctcacc
ttacataacgttctgcgcgtccgcggaatactaatgaatggtgagatcgtagaatttggc
ggcttagccccagatgcacccggccttgatttgctagcaatcatgatgggcagcgaaggt
atgctcgcggttgtgactgaagtgacagttaaattggttgctaaaccaaagttggctcgc
gtgatcatggcaagttttgatgacatcgaaaaaggtggtaacgcagtagctgccatcatt
gctgcaggcattattcctgctggcttggaaatgatggataaagccaccactcgcgctgta
gaggaatttgtacacgcaggctatgacttagatgcagcggctattttgttatgcgaatcc
gatggcaccccagaagaagttgctgaagaaattgagcgcatgactaaggtgttggaacaa
gcaggcgctagcggtatacagatctcaaaagatgaaagtgagcgcttgaaattttggagt
ggtcgtaagaatgcattccctgctgcaggccgcctagcccctgattactactgcatggac
ggcaccattccccgccgtcatatcgccaccttactcaagcgtatccaaggcatggaagag
aaatatgggcttggttgcttaaacgtttttcatgctggtgacggcaatatgcatcctctg
attttgtttaacggcgccgatcaggaagagtggcatcgcgcagaagaattcggtactgaa
attttggaagcttgcgttgagcttggtggcaccattactggtgagcacggtgttggcatt
gaaaaaattaattcaatgtgcgtgcaatttggcgaaggtgagcgtgaatctttctggggc
gtgaagagcgccttcgatcctgagaaacttctcaacccagataaagcaattccgacactt
aatcgctgcgctgaatatggccgtatgcgtataagtggtggtcagttaccccatccagaa
ttggagcgcttctaa
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