Puma yagouaroundi (jaguarundi): 121013069
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Entry
121013069 CDS
T07555
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04120
Ubiquitin mediated proteolysis
pyu04137
Mitophagy - animal
pyu04141
Protein processing in endoplasmic reticulum
pyu05012
Parkinson disease
pyu05014
Amyotrophic lateral sclerosis
pyu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121013069 (PRKN)
04120 Ubiquitin mediated proteolysis
121013069 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121013069 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
121013069 (PRKN)
05014 Amyotrophic lateral sclerosis
121013069 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
121013069 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pyu04131
]
121013069 (PRKN)
04121 Ubiquitin system [BR:
pyu04121
]
121013069 (PRKN)
03029 Mitochondrial biogenesis [BR:
pyu03029
]
121013069 (PRKN)
Enzymes [BR:
pyu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121013069 (PRKN)
Membrane trafficking [BR:
pyu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121013069 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
121013069 (PRKN)
Xenophagy
Other xenophagy associated proteins
121013069 (PRKN)
Ubiquitin system [BR:
pyu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121013069 (PRKN)
Mitochondrial biogenesis [BR:
pyu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121013069 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
IBR
Dsc3_N
Rad60-SLD_2
Crinkler
Motif
Other DBs
NCBI-GeneID:
121013069
NCBI-ProteinID:
XP_040304535
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRDDLTVQSCD
LDQQSIVHVVLRPWRKGPEREGSDGPQNALEGSRREPESLTRVDLSSSVLPAHSVGLAVI
LNNDREETLPAGRPAGRPPYNSFYVYCKGPCQRIQPGKLRVRCGTCRQATLTLAQGPSCW
DDVLIPNRMTGECQTASCPGTTAEFFFKCGAHPTADKETSVALNLITTNSRGITCITCTD
IRSPVLVFQCNHRHVICLDCFYLYCVTRLNDRQFTHDPQLGYSLPCVAGCPNSLIKELHH
FRILGEEQYNRYQQYGAEECVLQMGGVLCPHPGCGAGLLPEPGRRKVTCEGGNGLGCGFV
FCRDCKEAYHEGECSTLFEASGAVSQAYRVDEKAAEQARWEEASKETIKKTTKPCPRCHV
PVEKNGGCMHMKCPQPQCRLEWCWACSCEWNRACMGDHWFDV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaagtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ttgcgtgtgattttcgccgggaaggagcttagggatgacttgactgtgcagagctgtgac
ctggaccagcagagcatcgttcatgttgtgctgagaccctggagaaaaggcccagaaagg
gaaggaagtgacggcccacaaaacgccctggagggctcgaggagagagcctgagagcttg
acccgtgtggacctcagcagctcggtcctccctgcgcactcggtgggtctggctgtgatc
ctgaataatgaccgtgaggagaccctgccagctggaaggccagcaggtagaccgccttac
aacagcttttacgtttattgcaaaggcccctgccaaagaatacagccaggaaaactcagg
gtgcggtgtggtacctgccgacaggcgacgctcaccttggcccagggtccatcttgctgg
gacgatgtcttaatcccaaaccggatgactggtgaatgtcaaactgcaagctgtcctggg
actacagccgagtttttctttaaatgtggagcacacccaaccgctgacaaggaaacatca
gtggctttgaacctgatcacaacaaacagtcgaggcatcacctgcataacatgtaccgac
atcaggagccctgtgctggttttccagtgcaaccatcgtcacgtgatttgcttagactgt
ttctacttatactgtgtgacaagacttaacgacaggcagtttacccatgaccctcagctg
ggctactctctgccgtgtgtggctggctgccccaactccttgattaaagagctccatcac
ttcaggatccttggagaagagcagtacaaccggtaccagcaatatggcgctgaagagtgt
gtgctccagatggggggcgtgctgtgccctcaccctggctgtggagcagggctgcttccc
gagccaggcaggaggaaggtcacttgtgaagggggaaatggtctgggctgcgggttcgtc
ttttgccgggactgtaaggaagcgtaccatgaaggtgaatgcagcaccctgtttgaagcc
tcaggagcagtttctcaggcctacagagttgacgagaaggccgcggaacaagctcggtgg
gaagaggcctctaaagaaacaatcaagaaaaccaccaagccctgtccccgttgccatgtg
ccagttgaaaaaaatggaggatgcatgcacatgaagtgcccgcagccccagtgccgtctg
gagtggtgctgggcctgcagctgcgagtggaaccgcgcctgcatgggggaccactggttc
gacgtgtag
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