Puma yagouaroundi (jaguarundi): 121037724
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Entry
121037724 CDS
T07555
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121037724 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyu03400
]
121037724 (LIG4)
Enzymes [BR:
pyu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121037724 (LIG4)
DNA repair and recombination proteins [BR:
pyu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121037724 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
121037724
NCBI-ProteinID:
XP_040343022
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MATPQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTVQQVNDLLDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSVGLTDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGFNYTD
QFGDSPREGSLTPFIHSAFKTDVQTCILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYDILTSVFTPIPGRIDIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQIKATEIVPSEMYKTGCTLRFPRIEKIREDKEWYECTTLDDLE
QLRGKASGKLASKHLYVGGDDEPQEKRRKAAPRIKKVVGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTNSHPKPDLENRLAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNEHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSGEQSPGETASMIANLEYRYSWDHSPLSMFRHHIIYLDLYAVVNDLSTKIEGTRLAF
TALELRFHGAKVVSCLAQGVSHVIIGEDHSRVANLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccacagacttcacaaactgttgcgtctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgggcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcatgatgcccttcataagaaccaaaaagatgtc
agggactctttttatccagcaatgagacttattctccctcagctcgaaagagaaagaatg
gcctatggaatcaaagaaaccatgcttgctaaactttatattgaattgcttaatttacct
agagaaggaaaagatgcccttaagcttttaaattacaggacacccactggaactcgtgga
gatgctggagactttgcgatgattgcgtatttcgtgttgaaaccaagatgtttgcagaaa
ggaagtttaacagtacagcaagtaaatgaccttttagactcaattgccagcaataattct
gccagaagaaaggacctaataaaaaagagtcttcttcagcttataagtcagagttcagca
ctggaacaaaagtggcttatacggatgatagtcaaggacttgaaacttggctttagtgag
caatctgtattttctgccttccacaacgatgctgccgagttgcataatgtcaccacggat
cttgaaaaagtctgtaggcaactgcacgatccttccgtcggacttactgatatttctatc
actttattctctgcctttaaaccaatgctggctgccatagcagatattgagagaattgag
aaggacatgaaacaccagagtttctacattgagaccaagctagacggtgagcgtatgcaa
atgcacaaggatggggatgtgtatcagtacttctcccggaacgggtttaactatacagat
cagtttggagattctccacgggaaggctctcttacaccattcattcacagtgcattcaaa
acagatgtgcaaacctgtatcctggatggtgagatgatggccttcaaccctaatacacaa
acttttatgcaaaaggggaataagttcgatatcaagagaatggtggaagattccgatctg
caaacttgttactgtgtttttgacgtactgatggttaataataaaaagctagggcgtgag
accctgaaaaagaggtacgacattctcactagtgtttttacaccaataccaggtaggata
gacatagtgcaaaaaacacaagctcatacgaaaaaagaagtaattgatgctttgaatgaa
gcaatagacaaaagagaggagggaatcatgatcaaacaccctctatccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcgatgggttgatggat
gaactggacaccttaattgtggggggctattggggtaaaggttcgcgaggcggaatgatg
tctcattttctgtgtgctgtagcagagaaacctcctcctggtgaaaagccctccatgttt
cacactctctgtcgtgttggttcaggttataccatgaaagaactgtatgatctgggtttg
aaattggccaagcattggaagccttttcataaaaaagctccaccaagtagcatcttatgt
ggaacagagaagccagaagtgtacattgagccttgtcattctgtcatcgttcagattaaa
gcaacagagatcgtccccagtgagatgtataaaactggctgcaccttgcgtttcccccga
attgaaaagatcagagaagacaaagagtggtatgaatgtaccaccctagatgacttagaa
caacttcgagggaaagcatctggaaagcttgcgtccaaacacctttatgtcgggggtgat
gatgaaccacaagagaagaggcggaaagctgccccaaggatcaagaaagttgttggaatc
attgagcacctaaaagcacctaacctttctaatgtaaacaaagtttctaatgtatttgaa
gatgtggagttttgtgttatgagtggaacaaacagccatccaaagcccgatctggagaac
agacttgcggaatttggtggttatatagtacaaaatccaggcccagacacctactgtgtg
attgcagggtccgagaacatcagggtgaaaaacataatttcttccaatgaacatgatgtt
gtcaagcctgagtggctgttagagtgttttaagaccaaaagctgtgttccgtggcaacct
cgctttatgattcatatgtgcccatcgacgaagcagcattttgcccgtgaatatgattgt
tatggtgatagttatttcgttgatacagatttgaaccaactgaaagaagtgttctcagga
attaaaaattccggcgaacaaagtcctggagaaacagcttccatgattgctaatttagaa
tatcgatattcctgggaccactccccactcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttgttaatgacctgagtaccaaaatcgaggggacgaggttagctttt
acagctttggaacttcgatttcatggagcaaaagtagtttcttgtttagctcagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttgcaaatttgaaagcttttcgaaga
actcttaagagaaaatttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgaattgcaggaggaaaatcagtatttggtttaa
DBGET
integrated database retrieval system
