Puma yagouaroundi (jaguarundi): 121043031
Help
Entry
121043031 CDS
T07555
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121043031 (COL22A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121043031
NCBI-ProteinID:
XP_040350425
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MRVPTRGRAVACLLWLLLLWSGDGGCRAQRAGCKTVHYDLVFLLDTSSSVGKEDFEKVRQ
WVANLVDTFEVGPERTRVGVVRYSDRPATAFELGLFGSREEVKAAARHLAYHGGNTNTGD
ALRFITRHSFSPQAGGRPGDRAFKQVAILLTDGRSQDLVMDAAAAAHRAGIRIFAVGVGA
ALKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVQGDRFKHTNGD
SKEITGFDLMDLFRVKEILGKRDNGVQSSYVRMGSFPVVQRTEDVFTQGLPDEYAFVTTF
RFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYDAVGAMKDAVRVVFQGPRVSDL
FDRDWHKIALSIQAQNVSLYIDCVLVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQ
RIVIYCDSRHAELETCCDIPSGPCQVTMLTEPSPLPQRPPTVGSEQIGFLKTINCSCPAG
EKGEKGSDGPVGLPGPKGATGATGLAGAPGPKGEKGDMGRGPFVHGEKGEKGSLGLPGPP
GRDGSKGMRGEPGEPGLPGEVGMRGFQGPPGPPGPPGHVGAPGVQGERGEKGARGEKGER
GLDGFPGKRGETGEQGRPGPPGVAGPQGEKGDVGPAGPPGVPGSVVQREGLKGEQGAPGP
RGHQGPPGPPGAPGLMGPGGKAGPPGLQGLRGKKGEVGPPGTPGLLGPQGPPGPPGVPGP
PGPGGPPGLPGEIGFPGKPGHPGQAGPPGKDGQNGAPGLPGPKGQPGERGEDGLPGKPGP
RGEVGEQGLAGRPGDKGEAGVPGAPGFPGVRGQNGQQGEKGELGLPGLKGDPGEKGEVGP
PGPPGLPGTTPLFTPHPRMPGERGPKGEKGDPGMPGEPGSQGRPGELGPRGPIGAPGAKG
QEGPRGAPGAAGNPGTPGAAGLPGASGPPGSAGPPGIRGPPGKDGEHGEKGAAGEEGSPG
PAGPRGDPGAPGLPGIPGQGKDGEPGLRGPPGLPGPLGTKGDRGAPGIPGSPGNRGDPGI
GLAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGQDGVPGNPGERGPPGKPGPSSLLSPG
DINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLQGKPGREGTEGKKGDAGPRGLPGPPGIA
GPQGSKGERGAAGEAGQKGDQGHPGVPGFMGPPGNPGPRGADGVAGAAGPPGIQGPPGKE
GPPGPEGPSGLPGIPGEEGKEGRDGKPGPPGEPGKTGDPGLPGPEGARGLPGFKGHTGDS
GAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPPGLRGPPGKNGSPGSPGDPGPAGSP
GQKGNKGDHGSPGLPGFLGPRGPQGEPGEKGIPGKEGTPGKPGEPGPKGERGDPGNKGDK
GPPGGKGQPGDPGIPGHKGHTGLMGPQGPPGENGLAGPPGPPGQPGFPGLRGESPSMDTL
RRLIQEELEKQLETKLAYLLAQRPPAQMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPG
QGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGAPGPQ
GETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPGNVKGP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttcccacgcgcgggagagccgtggcctgcctcctgtggctgctgttgctgtgg
agcggggacggcggctgtcgggcccagagggcaggctgcaagaccgtgcactacgacctg
gtcttcctcttggacacctcctccagcgtgggcaaggaggactttgagaaggtgcggcag
tgggtggccaacctggtggacaccttcgaggtgggtcccgagcgcacccgcgtgggcgtg
gtgcgctacagcgaccggccggccacggccttcgagctgggcctctttggctcacgggag
gaggtcaaggcggcggcgcggcacctggcctaccacggcggcaacaccaacacgggcgat
gcgctgcgcttcatcacgcgccacagcttctcgccgcaggccggcggccgccccggggac
cgcgccttcaagcaggtggccatcctcctgaccgacggccgcagccaggacctggtgatg
gacgccgcggccgccgcccaccgcgcgggcatccgcatcttcgccgtgggcgttggggcg
gcgctcaaggaggagctggaggagatcgcctcggagcccaagtccgcacacgtcttccac
gtgtccgacttcaacgccatcgacaagatccgcggcaagctgaggcgccgcctgtgcgaa
aacgtgctgtgccccagcgtccgtgtgcaaggagaccgatttaagcacaccaatggcgac
agcaaggaaatcacaggttttgacctgatggatttgttccgtgtgaaggagatcctgggg
aagagagacaacggagtgcagagttcctatgtccggatgggatccttccctgtggtgcag
aggacagaggatgtgttcacacaaggtttgcctgatgagtatgccttcgtcaccaccttc
cggttcaggaaaacgtctcggaaagaagactggtacatctggcaggtcattgaccagtac
gggatcccacaggtctccatccggctggatggcgagaacaaggcagtggagtacgatgcc
gtgggcgccatgaaggacgccgtgagggtggtgttccaaggcccccgggtcagtgacctc
tttgaccgggactggcacaagatcgccctgagcatccaggcccagaatgtctccctgtac
atcgactgtgtgctggtgcagacgctgcccatcgaggagcgggagaacatcgacatccag
ggcaagaccgtgatcggcaagcgcctgtatgacagcgtgcccatcgactttgacctgcag
cggattgtgatttactgtgactcccgacacgcggaattggagacttgctgtgacatcccc
tcaggcccgtgccaggtgactatgctaacagagccttcgcccctgccccagcggcctccc
accgtgggcagtgaacaaatcgggtttttgaagaccatcaactgctcctgcccggctgga
gaaaagggcgagaaggggtccgatggtcccgtaggactccccggcccaaagggagccacg
ggagccactgggttggctggagctcctggacccaagggagaaaaaggtgacatgggcagg
gggccttttgtccatggagagaagggtgaaaagggttccctgggcctgcccggtccccct
gggagagacggcagcaaaggcatgcggggggagccgggagagccagggcttcctggagag
gtgggaatgcggggattccaaggaccacctggaccccccgggcctcctggacacgttgga
gctcctggtgtccaaggagaacgaggtgaaaagggagcccgaggagaaaagggggagcga
ggcctggatggattccctgggaagcgtggggagacaggagagcagggaagacctggtcct
cctggcgtggcagggccccagggagagaagggtgatgtggggcctgcaggacctcctggg
gtaccgggctctgtggtgcagagagagggcctgaagggcgagcagggagctccaggacca
cgaggccaccagggcccacctgggccaccaggagctccgggtctgatgggtcccggaggc
aaggctggacctcctggtttgcaaggtctccgggggaagaaaggagaagtgggcccaccg
ggaacccctggattgctggggccgcagggccctccaggaccacctggcgtccccggtccc
cctggacccggaggccccccgggtttacctggagagatcggcttcccaggaaaacctggg
caccccgggcaggcgggcccacctggaaaggacgggcagaatggagccccaggcctaccg
ggacccaaggggcagccaggagagagaggggaagacggtctgcctggaaaacccggcccc
aggggtgaagttggggagcagggcctggcaggccgacctggagacaagggagaggcaggt
gtccctggtgctccaggatttccaggcgtgcggggacagaatggacagcagggcgagaaa
ggggagctgggcctcccaggcctgaaaggtgacccaggcgaaaagggtgaagttggtcct
cccggcccccctgggttacctggaacgacgcccctgttcacgccgcaccccaggatgcca
ggagaacgagggccgaaaggagagaagggggatcccggcatgcctggcgagccggggtct
caaggccgtcctggagaactggggcctcggggacccatcggagcgccgggtgccaaggga
caagaaggcccccggggggcacctggagcggctggaaaccctgggactcctggagctgca
ggcctgcctggtgccagtggccccccaggaagcgcgggcccacctggcatcagaggcccc
cctggaaaagatggggagcacggtgagaagggagcagcaggtgaagaagggagtccagga
ccagctggtcccagaggtgatcctggtgctcccgggctcccagggatacccggacaggga
aaagatggagagccggggcttcgtgggccacccggattacctggacctctaggaaccaag
ggggaccgaggtgcacctgggatccctggctcccctggcaaccgtggcgacccaggcatt
gggttggctggccctcctggaccctctggaccaccaggagacaaagggcccccgggatcc
cgaggcttacccggattccccggcccccagggaccagctggccaggacggtgtaccagga
aatccaggagaaagagggcctcctggaaaaccagggccttcttctctactgtctccaggg
gacataaatctcttggtcaaggatgtgtgcaatgactgccctccaggccccccgggcctt
cctggtctgccaggttttaaaggggacaaaggtctccagggaaagccagggagagaaggc
acagaagggaaaaagggagatgctgggcccaggggcctcccagggcctccaggaatcgct
ggaccacagggaagtaaaggagagcgtggtgcagctggtgaagctggacagaaaggtgac
cagggtcatcctggagttcctggtttcatgggaccccccgggaaccctgggccacgggga
gcggatggcgttgctggggccgctggacctccagggatccaagggccgccggggaaagaa
ggtcctcctggccctgaaggcccatctgggttacccggaatcccgggagaagaaggcaaa
gagggcagagatggaaaaccaggtccccccggggagccgggcaaaactggagacccgggt
ctaccaggaccagagggagcccgcggcctgcctggcttcaagggacacacaggcgactct
ggtgcaccgggcccccggggagagcctggtgccatggggccccctggccgggaagggtcg
ccaggaaaagatggtgacactggacccacagggccacagggtcccccaggactaaggggc
ccaccgggtaagaacggatcaccgggatctccaggagaccctggccctgcaggaagccct
ggccagaaggggaacaaaggagaccacggcagcccgggactccccggctttctgggtccc
cgggggcctcagggggagccaggagagaagggcatcccaggcaaggagggcacccccggg
aagcccggagagccaggacccaaaggagaaaggggagaccccgggaacaaaggtgacaaa
ggaccccctggtgggaagggccagcctggggaccctggaatccctggtcacaaaggccac
acaggcctgatgggcccccaaggaccacctggggagaatggactggccgggcccccgggg
cctccgggacagccaggatttccgggactgaggggggagtctccctccatggacaccctg
cggcggctcatccaagaagagcttgagaaacagctggaaaccaaacttgcctacctcctg
gcccagaggccaccggcacagatgaagtcatctcaaggcagacctgggcccccggggccc
ccaggaaaagatgggcttccaggaagggcaggccccatgggcgagccagggcggcccgga
caggggggtctggaagggccgtctggaccaataggtcccaaaggtgagcgaggagccaaa
ggagacccgggtgcacctggagttggcctccgaggggagatggggcccccaggcatccca
ggtcagcccggggaacctggctatgctaaagatgggctccccggggcccccggccctcaa
ggggagacgggaccagcgggacaccctggccccccaggcccgccggggccccctggccag
tgtgacccctcgcagtgtgcctacttcgccagcctcgctgcccggccagggaatgtgaag
ggcccctag
DBGET
integrated database retrieval system
