Pyrobaculum sp. WP30: PYWP30_01405
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Entry
PYWP30_01405 CDS
T04013
Name
(GenBank) thermosome subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pyw
Pyrobaculum sp. WP30
Pathway
pyw03018
RNA degradation
pyw04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PYWP30_01405
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
PYWP30_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyw03019
]
PYWP30_01405
03110 Chaperones and folding catalysts [BR:
pyw03110
]
PYWP30_01405
03029 Mitochondrial biogenesis [BR:
pyw03029
]
PYWP30_01405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyw04147
]
PYWP30_01405
Enzymes [BR:
pyw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PYWP30_01405
Messenger RNA biogenesis [BR:
pyw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PYWP30_01405
Chaperones and folding catalysts [BR:
pyw03110
]
Heat shock proteins
HSP60 / Chaperonin
PYWP30_01405
Mitochondrial biogenesis [BR:
pyw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PYWP30_01405
Exosome [BR:
pyw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PYWP30_01405
Exosomal proteins of other body fluids (saliva and urine)
PYWP30_01405
Exosomal proteins of breast cancer cells
PYWP30_01405
Exosomal proteins of colorectal cancer cells
PYWP30_01405
Exosomal proteins of bladder cancer cells
PYWP30_01405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Dak2
CIP7_N
Motif
Other DBs
NCBI-ProteinID:
AKT35030
LinkDB
All DBs
Position
1246905..1248554
Genome browser
AA seq
549 aa
AA seq
DB search
MSQAVLTQIGGVPVLVLKEGTQRAFGKEALRLNIMIARAIAEVMRSTLGPKGMDKMLIDS
LGDITITNDGATILDEMDVQHPIAKLLVEISKSQEEEAGDGTTSAVVLAGALLEEAEKLL
EKNIHPTVVVGGFKKALDVAAEHLRKVAVPVNRTDAETLKKIAMTSMGGKISETVKEYFA
DLAVKAVLQVAEERDSKWYVDLDNIQIVKKHGGSLLDTQLVYGIIVDKEVVHAAMPKRVV
NAKIALLDAPLEVEKPEIDAEIRINDPTQMRAFLEEEEKILKSYVDKLKALGVTALFTTK
GIDDIAQYYLAKAGILAVRRVKRSDIEKLVRATGARLVTNIEDLTEADLGFAGLVEERRV
GDEKMVFVEQCKNPRAVSILVRGGFERLVDEAERNLDDALSVVADVVEEPYILPAGGAAE
VEAAKAVRAFAPKVGGREQYAVEAFARALEAIPKALAENAGLDPIDILTELTHKHEQPDG
WRYGLDVYQGKVVEMMALGLIEPLTVKLNALKVAVEAASMILRIDEIIAASKLEKEEKEK
KEEKKEEFD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggcagtattaacccaaataggtggcgtgccggtgctcgtgttgaaggagggc
actcagagggcttttggaaaagaggcgttgaggctgaatataatgattgccagagccata
gccgaggttatgagatccacgcttggcccgaagggcatggacaagatgctcattgactcc
ctcggcgacatcaccatcaccaacgacggcgcaacgatcctggacgagatggacgtccag
caccccatcgccaaactgctggtagagatatcgaagtcccaggaggaggaggccggcgac
ggcacaacctccgccgttgtgctggctggcgctctgctggaggaggctgagaagcttctg
gagaagaacatccaccccaccgttgtggtgggtggattcaagaaggctcttgacgtggcg
gctgagcacctccgaaaggttgcggtcccggtgaataggacagacgcggagactttgaag
aagatagccatgacctcgatgggcgggaagatttccgagactgtgaaggagtattttgca
gacttggctgtgaaggccgtgttgcaggtcgccgaagagagagacagtaagtggtatgtg
gatcttgacaacatccagatcgtgaagaagcacggcggctccctcctcgacacgcagctt
gtctatggcataattgtggacaaggaggtggtgcacgccgcgatgcctaagagggttgta
aatgcgaagatcgcgcttctagacgctcctcttgaggtggagaagccggagatcgatgcc
gagatcaggatcaatgaccccactcagatgagggcgtttctggaggaggaagagaagatc
ctcaagagctacgtggataagctcaaggcgcttggcgttactgccctgtttacgacgaag
ggtattgacgacattgcccagtactacctcgccaaagccggcatccttgccgtgaggcgc
gtgaagcgtagcgacattgagaagcttgttagggcgaccggtgccaggctggtgacaaac
attgaggacttgaccgaggccgacctcggctttgccgggcttgttgaggagcggcgtgtt
ggcgatgagaagatggtgtttgtggagcagtgtaagaacccgagggctgtgtctatcctg
gtgagaggcggcttcgaaagacttgttgacgaggcggagcggaacctagatgacgcgctg
tctgtggtggccgacgtggtggaggagccctacatcttgcctgctggcggcgccgccgag
gttgaggcggctaaggccgttagggcgtttgcgcctaaggtgggcggcagggagcagtac
gccgtggaggcttttgcaagggcgcttgaggccatcccgaaggctcttgcggagaacgcg
ggtctcgaccccattgatatattgactgagctgactcataagcatgagcaacctgacggc
tggcgttacggccttgacgtgtaccagggcaaggttgtggagatgatggctcttgggctc
attgagccgcttacggtgaagctcaacgcgttgaaagtcgctgttgaggcggcttccatg
atcctgcgtatcgacgagatcattgccgcctctaagctggagaaggaggagaaagagaag
aaggaggagaagaaggaggagttcgactag
DBGET
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