KEGG   Pyrobaculum sp. WP30: PYWP30_01405
Entry
PYWP30_01405      CDS       T04013                                 
Name
(GenBank) thermosome subunit
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pyw  Pyrobaculum sp. WP30
Pathway
pyw03018  RNA degradation
pyw04156  Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:pyw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PYWP30_01405
 09140 Cellular Processes
  09143 Cell growth and death
   04156 Integrated stress response (ISR) signaling pathway
    PYWP30_01405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pyw03019]
    PYWP30_01405
   03110 Chaperones and folding catalysts [BR:pyw03110]
    PYWP30_01405
   03029 Mitochondrial biogenesis [BR:pyw03029]
    PYWP30_01405
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pyw04147]
    PYWP30_01405
Enzymes [BR:pyw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     PYWP30_01405
Messenger RNA biogenesis [BR:pyw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PYWP30_01405
Chaperones and folding catalysts [BR:pyw03110]
 Heat shock proteins
  HSP60 / Chaperonin
   PYWP30_01405
Mitochondrial biogenesis [BR:pyw03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    PYWP30_01405
Exosome [BR:pyw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PYWP30_01405
  Exosomal proteins of other body fluids (saliva and urine)
   PYWP30_01405
  Exosomal proteins of breast cancer cells
   PYWP30_01405
  Exosomal proteins of colorectal cancer cells
   PYWP30_01405
  Exosomal proteins of bladder cancer cells
   PYWP30_01405
SSDB
Motif
Pfam: Cpn60_TCP1 Dak2 CIP7_N
Other DBs
NCBI-ProteinID: AKT35030
LinkDB
Position
1246905..1248554
AA seq 549 aa
MSQAVLTQIGGVPVLVLKEGTQRAFGKEALRLNIMIARAIAEVMRSTLGPKGMDKMLIDS
LGDITITNDGATILDEMDVQHPIAKLLVEISKSQEEEAGDGTTSAVVLAGALLEEAEKLL
EKNIHPTVVVGGFKKALDVAAEHLRKVAVPVNRTDAETLKKIAMTSMGGKISETVKEYFA
DLAVKAVLQVAEERDSKWYVDLDNIQIVKKHGGSLLDTQLVYGIIVDKEVVHAAMPKRVV
NAKIALLDAPLEVEKPEIDAEIRINDPTQMRAFLEEEEKILKSYVDKLKALGVTALFTTK
GIDDIAQYYLAKAGILAVRRVKRSDIEKLVRATGARLVTNIEDLTEADLGFAGLVEERRV
GDEKMVFVEQCKNPRAVSILVRGGFERLVDEAERNLDDALSVVADVVEEPYILPAGGAAE
VEAAKAVRAFAPKVGGREQYAVEAFARALEAIPKALAENAGLDPIDILTELTHKHEQPDG
WRYGLDVYQGKVVEMMALGLIEPLTVKLNALKVAVEAASMILRIDEIIAASKLEKEEKEK
KEEKKEEFD
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgagtcaggcagtattaacccaaataggtggcgtgccggtgctcgtgttgaaggagggc
actcagagggcttttggaaaagaggcgttgaggctgaatataatgattgccagagccata
gccgaggttatgagatccacgcttggcccgaagggcatggacaagatgctcattgactcc
ctcggcgacatcaccatcaccaacgacggcgcaacgatcctggacgagatggacgtccag
caccccatcgccaaactgctggtagagatatcgaagtcccaggaggaggaggccggcgac
ggcacaacctccgccgttgtgctggctggcgctctgctggaggaggctgagaagcttctg
gagaagaacatccaccccaccgttgtggtgggtggattcaagaaggctcttgacgtggcg
gctgagcacctccgaaaggttgcggtcccggtgaataggacagacgcggagactttgaag
aagatagccatgacctcgatgggcgggaagatttccgagactgtgaaggagtattttgca
gacttggctgtgaaggccgtgttgcaggtcgccgaagagagagacagtaagtggtatgtg
gatcttgacaacatccagatcgtgaagaagcacggcggctccctcctcgacacgcagctt
gtctatggcataattgtggacaaggaggtggtgcacgccgcgatgcctaagagggttgta
aatgcgaagatcgcgcttctagacgctcctcttgaggtggagaagccggagatcgatgcc
gagatcaggatcaatgaccccactcagatgagggcgtttctggaggaggaagagaagatc
ctcaagagctacgtggataagctcaaggcgcttggcgttactgccctgtttacgacgaag
ggtattgacgacattgcccagtactacctcgccaaagccggcatccttgccgtgaggcgc
gtgaagcgtagcgacattgagaagcttgttagggcgaccggtgccaggctggtgacaaac
attgaggacttgaccgaggccgacctcggctttgccgggcttgttgaggagcggcgtgtt
ggcgatgagaagatggtgtttgtggagcagtgtaagaacccgagggctgtgtctatcctg
gtgagaggcggcttcgaaagacttgttgacgaggcggagcggaacctagatgacgcgctg
tctgtggtggccgacgtggtggaggagccctacatcttgcctgctggcggcgccgccgag
gttgaggcggctaaggccgttagggcgtttgcgcctaaggtgggcggcagggagcagtac
gccgtggaggcttttgcaagggcgcttgaggccatcccgaaggctcttgcggagaacgcg
ggtctcgaccccattgatatattgactgagctgactcataagcatgagcaacctgacggc
tggcgttacggccttgacgtgtaccagggcaaggttgtggagatgatggctcttgggctc
attgagccgcttacggtgaagctcaacgcgttgaaagtcgctgttgaggcggcttccatg
atcctgcgtatcgacgagatcattgccgcctctaagctggagaaggaggagaaagagaag
aaggaggagaagaaggaggagttcgactag

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