Pseudomonas zarinae: HU749_027640
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Entry
HU749_027640 CDS
T07889
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pza
Pseudomonas zarinae
Pathway
pza00260
Glycine, serine and threonine metabolism
pza01100
Metabolic pathways
Module
pza_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU749_027640 (dgcB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_2
Fer4_6
Fer4_16
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QXH94534
LinkDB
All DBs
Position
complement(6241740..6243689)
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AA seq
649 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRPAKVDLIGGLFAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIVLAILVHGFGLHNRILGYALLLMSAVMFVGAIFMYLRRRNPP
ARLSKGPWMRLPKSLLAFSASFFLVTLPVAGILPENFGGWLVAAILGVGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDPSAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPVGEHGG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKIDFAVLGLEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFH
VLKNEYGAFDGNYLVQHHSTYMAEIIDAGALNLGQHKGDSVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPMIKDIAELVADALLEDAAPSKPVAPAKREPAEVH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttcccatcctgctgtttgctgccctgggcctcgcggtccttggc
gccttgcggcgggtgaacatgtggcgccgcggacgaccggccaaggtcgatctgatcggc
ggtctcttcgccatgcccaagcgttatatggtggatttgcaccatgtggtggcgcgggac
aaatacattgccaatacccacgtcgcaactgccggtggtgcggtggcatcgattgtgttg
gcgattttggtacacggttttggcctgcacaaccgcatcctcggttacgccttgctgctg
atgtcggcggtgatgttcgttggcgcgatctttatgtacctgcgtcggcgcaatccgccg
gcccgtttgtccaagggcccctggatgcgcctgccgaaaagcctgctggccttctcggcg
tcgttcttcctggtgaccctgccggtggcgggcatcctcccggaaaacttcggcggttgg
ctggtggcggcgatcctgggtgtcggcgtgctgtggggtgtgtcggaattgtttttcggc
atgacctggggcgggccgatgaaacacgccttcgccggtgccctgcacctggcctggcac
cgccgagcggagcgctttggtggcggtcgttccaccggtctgaagccgttggacttgaac
gaccctagcgcaccgttgggtgtggaaaaacccaaggacttcacctggaaccaactgctg
ggcttcgatgcctgcgtgcagtgcggcaagtgtgaggctgcttgcccggcgttcgctgcc
ggccagccgttgaacccgaaaaaactcatccaggacatggtcgtcggcctggccggcggc
accgatgcgaaattcgctggcagcccttacccaggtaaacctgtcggtgagcatggcggc
aacccacatcaacccatcgtcaacggcctggtggatgccgagaccctatggtcctgcacc
acctgccgggcgtgcgtcgaggagtgcccgatgatgatcgagcacgtcgacgccatcgtc
gacatgcgccgccacctgaccttggaaaaaggcgccacgccgaacaagggcgccgaagtg
ctggaaaaccttatcgccaccgacaaccctggcggcttcgccccgggcgggcggatgaac
tgggcggcggacttgaacctgaacctgctcagcgagaagaaatccaccgacgtcctgttc
tgggtcggcgacggtgccttcgacatgcgcaaccagcgtaccttgcgcgcttttgtcaaa
gtgctcaaggcggcgaaaatcgacttcgccgtgctcggcctcgaagaacgcgacagcggc
gacgtggcccggcgcctgggtgatgaggcgacgttccagttgttggccaaacgcaatatc
cagaccttggccaaatacagcttcaaccgcatcgtcacctgcgacccccacagtttccac
gtactgaaaaacgaatacggcgccttcgatggcaactacctggtgcagcatcacagcacc
tacatggcggaaatcatcgacgccggcgcgctgaacctcggccagcacaagggcgacagc
gtgacttatcacgacccatgctacctgggccgctacaacggcgaatacgaggcgccgcgc
caggtgctgcgtgcgctgggtatcgaggtcaaggagatgcagcgttccggtttccgttcg
cgttgctgcggcggtggcggcggcgcgccgatcaccgacatcccgggtaagcagcgtatc
cccgacatgcgcatggaagacatccgcgaaaccggcgccgaactggtggccgtgggttgt
ccgcagtgcaccgcgatgctggaaggcgtggtcgagccgcggccgatgatcaaggacatt
gccgaactggtggccgacgcgctgctggaagacgcggccccaagcaagcctgtagccccg
gccaaacgtgaacctgcggaggtgcattaa
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