Quercus lobata (valley oak): 115951376
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Entry
115951376 CDS
T07350
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115951376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115951376
04147 Exosome [BR:
qlo04147
]
115951376
04090 CD molecules [BR:
qlo04090
]
115951376
Enzymes [BR:
qlo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115951376
Transporters [BR:
qlo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115951376
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115951376
CD molecules [BR:
qlo04090
]
Proteins
115951376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
AAA_22
AAA_29
ABC_ATPase
RsgA_GTPase
nSTAND1
AAA_15
AAA_21
AAA_5
APS_kinase
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
115951376
NCBI-ProteinID:
XP_030924453
LinkDB
All DBs
Position
7:43206608..43213580
Genome browser
AA seq
1360 aa
AA seq
DB search
MSQDSEEIKTIEQWRWSEMQGLELVSSAPPDPFKSNTPTPTLTPTHPHIEPQALGQEASS
VAAAAAQQTKGMESSEPKKDSSGGSSSGEKPEAVPSVGFKELFRFADGLDYILMAIGSVG
AVVHGCSLPVFLRFFADLVNSFGSNANNMDKMMQEVLKYALYFLVVGAAIWASSWAEISC
WMWTGERQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVFAINSDAVMVQDAISEKFGNFI
HYMATFVSGFVVGFTAVWQLGLVTLAVVPLIAVIGGIHTTTLAKLSGKSQEALSQAGNIV
EQTIVQIRVVFAFVGESRALQSYSSALRVAQRLGYKSGFAKGLGLGATYFVVFCCYALLL
WYGGYLVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMAAFVKAKVAAAKIYRIIDHKPS
VDRNSESGLELESVTGLVELKNVDFSYPSRPDVLVLNNFSLNVPAGKTIALVGSSGSGKS
TVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD
ANQVEIEEAARVANAHSFIIKLPELFETQVGERGLQLSGGQKQRIAIARAMLKNPAILLL
DEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDE
LFAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR
RLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCG
SLSAFFAYVLSAVLSVYYNQNHAFMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGEN
LTKRVREKMLSAVLKNELAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALM
LVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIAN
VRTVAAFNSEAKIVNLFSTSLRTPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWL
VKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDQ
DATPVPDRLRGEVELKHVDFSYPTRPDVPIFRDLTLRARAGKTLALVGPSGCGKSSVIAL
IQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAFVPQEPCLFATTISENIAYGHESATEAE
IIEAATLANAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATS
ALDAESERSVQEALERACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSQLLKNH
PDGCYARMIQLQRFSHSQVIGMASGSTSSARPREDEEKEA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagataaagacgattgagcagtggagatggtccgaaatgcaa
ggtcttgagcttgtctcctctgctcctcctgacccttttaaatccaacacaccaacacca
acactaacaccaacacacccacacatagagcctcaagcattaggacaagaagcatcatca
gtagcagcagcagcagctcagcagacaaaaggaatggagagctctgagcccaagaaggat
tcaagtggtggtagtagtagtggagagaagcctgaggctgtacctagtgttgggtttaag
gaactcttcaggtttgctgatgggttggattacattcttatggcaattgggtctgttgga
gctgtagtacatggttgctctttgccagtgtttctcaggttctttgcggatcttgtcaat
tctttcgggtccaatgccaataacatggacaagatgatgcaggaagttctcaagtatgca
ttgtattttcttgtagtgggtgctgcaatatgggcatcttcttgggcagagatatcatgt
tggatgtggactggagagaggcaatcgacgaagatgagaatcaagtacttagaggccgct
ttgaaccaagacattcagttctttgacacagaggttcggacctcagacgtggtttttgcc
attaacagtgatgcagtgatggtccaagacgccattagtgagaagttcgggaattttatc
cactatatggcaacatttgtgtctggatttgtggtgggtttcactgctgtttggcaattg
ggtttggtcactcttgctgtggtgccactcatagctgtaattggtggtatccacaccacc
acattagccaagctctctggtaaaagccaggaagctctgtcacaggcaggaaacatagta
gaacagacaattgttcaaattcgggttgtttttgcatttgttggggaatccagagcgtta
caaagctactcgtctgcgctaagggttgcgcaaaggctcggttacaagagtggatttgca
aagggattgggattgggtgcaacttactttgttgttttctgctgctatgcgcttttgctc
tggtatggcggttatcttgttaggcaccactataccaatggaggacttgccattgccacc
atgtttgctgttatgattggtggactggctttgggccagtctgcaccaagcatggctgca
tttgtaaaggctaaagttgctgctgcaaaaatttatcgcataattgatcataaaccaagt
gtagaccgaaacagtgagtcgggtttggaattagagtcagttacaggtctggtggagctg
aaaaatgtggatttctcctacccatctaggccagatgttctggtccttaataatttctcc
ctaaatgtcccagctggcaagaccatagcattggttggcagtagtggctctggtaagagc
actgtggtgtcccttattgagagattctacgatcccacctcaggacaagttctgctggac
ggtcatgacataaagactctaaagctgaggtggttgaggcagcaaatagggcttgtaagc
caagagccggctctgtttgctaccaccattaaggaaaacatactcttgggtaggcctgat
gcaaatcaagttgagattgaagaggctgcaagagttgctaatgcccattcattcataatc
aagcttcctgaactctttgagactcaggtaggagaaagaggattgcagctctcaggggga
cagaagcagaggatagctatagctagggcaatgctgaaaaacccagctattctgctttta
gacgaagcaacaagtgcattggactcagagtcagaaaagctggtgcaggaggcccttgac
cggttcatgattggaagaacgactcttgtcattgcccatcgcctctccaccattcgcaag
gctgaccttgttgctgtactccagcagggtagtgtctctgaaattggaactcatgatgag
ctctttgccaaaggagaaaatggtgtctatgccaagctcattcgaatgcaggaaatggcc
catgaaactgctctcaacaatgcaagaaagagtagcgcaaggccttctagtgccaggaac
tcagtaagctcacctataattgcccgaaattcttcctatggccggtcaccatactcacgt
agactatctgacttctcaacgtctgattttagtctctccctagatgcctcacaccccaac
taccggttagaaaagcttgcattcaaggagcaagccagttctttctggcgccttgccaaa
atgaattcaccagaatgggtgtatgctttagttggctctataggctctgttgtttgcggc
tcacttagtgccttctttgcatatgttctaagcgctgtcctcagcgtctactacaatcaa
aatcatgctttcatgatcagagaaattgagaaatactgctatctgttaattgggctttca
tcggctgcacttctcttcaacacactacagcatttcttctgggatatagtgggagaaaat
ctcacgaaacgggtaagggagaaaatgctgtctgctgtactcaaaaatgaattggcatgg
tttgatcaggaggaaaatgagagtgctaggattgcagctaggctggctcttgatgccaat
aatgtgagatcagcaattggagaccggatttcagtgattgtgcagaacacagcactcatg
ctggttgcctgcactgcggggtttgttttgcagtggcgccttgcccttgtcctcatagct
gtcttccctgttgttgttgcagccactgttttgcagaaaatgttcatgactggtttctct
ggagacctagaagctgcccatgccaaggccacacaactagcaggggaggccatagccaat
gtaaggactgttgctgccttcaattcagaggcaaaaattgttaatcttttctccaccagc
ctccggactccactacgacgatgcttttggaaagggcagatttctggaagtggatttggg
attgctcagtttgcactatatgcttcatatgccctaggactctggtatgcttcctggctt
gtcaagcacgggatatccgatttctcaaagacaatccgagttttcatggtcctcatggta
tccgccaatggtgcagctgaaactctaaccttggctcctgacttcattaagggtggtcgg
gccatgcggtcagtctttgatctccttgaccgtagaactgaaattgagcctgatgatcaa
gatgccaccccagttccagaccgccttcgtggagaagttgaattaaagcatgtagacttc
tcttatcccactcgtcctgatgtgccaattttccgtgacctcactctccgtgcccgagca
gggaaaactcttgcactagtgggtcctagtggatgtggtaagagctcggtcattgcactt
atacagcgattctatgatccaacatctggacgggttatgattgatggaaaggacattcga
aaatacaatctaaagtccttaagacgacacattgcattcgttcctcaagagccatgcctc
tttgctactaccatttctgaaaacattgcttatgggcatgagtcagcaactgaggctgag
atcattgaagctgcaactctggccaatgcacacaagttcatatctggattgccagatgga
tacaaaacatttgtcggggaaagaggagttcaactttctgggggacagaagcagagaatt
gcaattgctcgggcatttgtgaggaaagcagaacttatgctgctggatgaggcaacaagc
gcacttgatgccgagtctgagagatctgtccaagaggctctagagcgtgcttgctcagga
aaaacaactattgttgttgcacataggctttcaactattaggaatgcacatgtcattgct
gtgattgatgatgggaaagtggcagaacaaggttcacactctcaactgctcaaaaatcac
cctgatgggtgctatgcacgcatgatacagttacaaagattcagtcacagccaagtcatt
ggaatggcatcaggttcaacatcttcagcaagacccagagaagatgaggagaaggaagct
tag
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integrated database retrieval system
