Quercus lobata (valley oak): 115952720
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Entry
115952720 CDS
T07350
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115952720
Membrane trafficking [BR:
qlo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115952720
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
115952720
NCBI-ProteinID:
XP_030925796
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All DBs
Position
7:complement(36377961..36394523)
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AA seq
1285 aa
AA seq
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MDPANTPLGKMLLDEITPVVMVLSTPLVEEASLKNHLSFVQMLSPFCSFNNIDVPVRTAS
DQPYRLQKFKLRLFSASDIRQPNLEVAKEQLKHFISQAGDKDDMFSDPPQISNLLASSES
EIQPSWFQFFNKELVRTVSFSEHEAFDHPVACLLVVSSKDEQPINRFIDLFNTDKLPSLL
NDGAMDPKILKHYLLVHDNQDGSPEKAAKILTEMKSTFGSNECQLLCINSSHDGPVEPQD
NPWAPYESDVSPSQCVGCFLNIDDSNEIKDLMQDLSSKHIIPYMEQKIRFLNQQVSATRK
GFRNQIKNLWWRKGKEDAVDSPDGPMYTFSSIESQIRVLGDYAFMLRDYELALSNYRLIS
TDYKLDKAWKRYAGVQEMMGLTFFMLDQSRKEAEYCMENAFNTYLKIGSLSQQNATRCGL
WWVEMLKTRDQYKEAAVVYFRLCSEEPLHSAVFLEQASYCYLLSKPPMLRKFGFHLVLSG
DRYKKCDQIKHAIRTYRSSVSVFEGIMWGHIKDNVHFRIGQWYAILGMDDLAVKHMLEVL
ACSHQPKTTQELFLRDFLQIVQKTGKTFEVLKLQLPQVNISSLKVVFEDHRTYASPAAAT
VRESLWQSLEEDIIPPLSNVRTNWLDLQSNSKKYKESNVCVAGEAVKVDIEFKNPLQIPI
SISGVSLICELSLGSDGMKFDASSSTVELQNDDDFKNLITNRDMSSDNVSFTLSEVDVLL
GGAETTVVKLTVTPKVEGLLQITGVRWKLSSSVVGFHNFESNHMKKKNAKGRRKSKHSCS
DNLKFIVIKSLPKLEGFIDSVPEKVYAGDLQRLVLELRNQSEFAVKNLKMKVSHPRFLNI
GNQKNLNSEFPACLERKTSSDPCCVGDSSSSLSQNVFLFPEDTLIQEGTPLLWPVWLWAA
IPGDINLYITVYYEMADVSRGMRFRTLRMHYNLQVVPSLDLSFQISPSPSRLHEFLVRMD
VVNKTSSESLQVHQLSSVGGQWEISLLQPVDTIFPSQSLMAGQSLSCFFMLKSCRKSLTS
EDKISTLSPVLGSDVGLGPEDSNQPLFDVSSSPLADFHHYERLHQEMSHQGDPNAVDFIL
ISRPLTSGDSERPHLFSHHACHCSTSNASPISWQVDGPRTLYHDFSASFCEINFRMIIYN
SSDAVASVHVKTFDSVNTGGHLSEGTSSPSGNQSGWHWHDASVEKDIKVTSDVLGSRVRK
SLSLESVTPFVWSGTSSTSIQIQPMSKTEIPLQICVFSAGIYDLSNYVLQWNLLSSEGPE
SLEGTRQSSGTCQGYPYYLSVLQSS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcgaacacgccacttggcaaaatgctattggacgagatcactccggtcgtc
atggtcctctctactcctctcgtcgaagaagcttccctcaagaaccacctctctttcgtt
cagatgctcagccctttctgctccttcaacaacatcgatgtacctgtacggacagcgagt
gatcagccttatcggcttcaaaagttcaagttgcggttgttttccgcttcggatattcgg
cagccgaatttggaggtagcgaaagagcaactgaaacattttattagccaagctggggac
aaagatgacatgttttcagacccgccccaaattagtaatctactcgccagctctgaatct
gaaattcaaccctcatggtttcagtttttcaataaagagcttgtacgtacggtgtctttt
tcagaacatgaagcttttgaccatcctgtggcatgtcttttggttgtttcctcaaaggat
gaacagcctattaacagatttattgacctatttaacaccgacaaattgccttctcttctt
aatgatggtgcgatggacccaaaaattttgaagcattatctattggtgcatgataatcaa
gatggcagtccagagaaagcagctaagattttgacagaaatgaagagtacatttggctca
aatgagtgtcaattactttgcattaattcttctcatgatgggccggttgaacctcaagat
aatccttgggctccttatgaatctgatgtttcacctagccagtgtgttggttgctttctt
aatattgacgactctaatgagataaaagatctcatgcaagatttatcatctaaacacatc
attccttacatggagcaaaaaatacgttttctgaatcaacaggtttccgccacacggaaa
ggttttagaaaccaaataaaaaatttatggtggagaaaagggaaagaagatgcagtggat
tccccagatggtcctatgtatacctttagctccattgaatctcagattagagttttgggt
gactatgccttcatgttacgggattatgaacttgcgttatcaaattatcgtctaatttcc
acagattacaagcttgataaagcctggaaacgttatgctggagtacaggaaatgatgggt
cttacattcttcatgttggatcaatcaagaaaggaggcagagtattgcatggaaaatgct
tttaatacttatttgaaaattgggtcattaagtcagcaaaatgcgacacggtgtggcctt
tggtgggtagagatgttaaagacaagagatcagtataaagaggctgctgttgtttacttt
cgcctttgtagtgaggaacctctacattcagctgtatttcttgagcaagcatcttattgc
tatttgttgtccaaacctcctatgttacgcaagtttggatttcatcttgttctgtctggt
gatcggtacaaaaaatgtgatcagattaaacatgcaattcgcacatatagaagttctgtg
tctgttttcgaaggaattatgtggggccatatcaaagacaatgttcatttccgaattgga
cagtggtatgctattcttgggatggatgacctggctgtcaaacatatgttggaggtcctg
gcctgtagtcatcaacccaagacaacgcaggagttattcctgagagactttcttcaaatt
gttcagaaaacagggaaaacatttgaggtattgaaacttcagctgcctcaggtcaacatc
tcttcacttaaggttgtttttgaagaccatcgaacttatgcatcacctgctgctgctact
gttagagaaagtttgtggcaatctttagaggaggacattattcccccattgtctaatgtc
aggactaactggttggatttacaatcaaactcaaaaaagtacaaagaatcaaacgtttgt
gtggcaggagaagcagtaaaggtggatatcgaatttaaaaacccactgcagatccctatt
tccatctccggagtttctctgatatgtgagctttctctaggatctgatggtatgaaattt
gatgcaagtagctcaactgtggagcttcagaatgacgatgacttcaaaaatttgatcacc
aatagggacatgagctctgacaatgtttcatttaccttatctgaggttgacgttttgttg
ggaggggctgaaacaactgtggtcaaactgacagttactcccaaagtcgaaggattgcta
caaattactggtgttaggtggaaattgtcaagttctgtagttggttttcacaactttgag
tccaatcatatgaagaaaaaaaatgcaaagggaagaaggaaatctaagcattcttgtagt
gataacctgaagtttatagtgatcaagagtctacccaagctcgagggtttcattgattct
gtacctgaaaaggtatatgcaggagatttacagcgtcttgttttggagttgaggaaccaa
tcagaatttgctgtgaagaatctgaaaatgaaggttagccatcctagatttctgaacatt
gggaaccagaaaaatttgaactcagagtttccagcttgcctagaaaggaagacaagctct
gatccatgttgtgttggtgatagttccagtagcttgtctcagaacgtgtttctgtttcct
gaggacactttaattcaagagggaacacccttactgtggcctgtttggctttgggctgcc
attcctggagacattaacttgtacataactgtatattatgagatggcagatgtatcacgc
ggcatgagattccggacgctacgcatgcattataatctgcaggtagtaccatcgttggac
ttgtcattccaaatcagtcccagtccatcaagattgcatgagttccttgtgcgcatggat
gttgtcaacaagactagctctgagagtttacaggttcatcagctatcatctgtcgggggc
cagtgggaaatctcacttcttcagcctgttgatacaatattcccttcacaatctttaatg
gctggtcaatcattgtcttgtttcttcatgcttaagagttgcaggaagtcattaacttct
gaagacaagatatctacactttccccagtccttggaagtgatgtaggattgggtcctgag
gatagtaatcaaccactttttgatgtttctagctcacctctggctgattttcatcattat
gaaagattgcaccaggaaatgtcacatcagggagacccaaatgcagttgacttcatatta
atttctcggccactgacttctggtgattctgaaagacctcatcttttttctcatcatgct
tgtcactgcagtacttcaaacgcaagcccaatatcgtggcaagtggatgggcctcggaca
ctatatcatgacttctctgcctccttttgcgaaattaattttaggatgattatttacaac
tcatcagatgctgttgcatctgttcatgttaaaacctttgattccgtcaatactggtggc
catctaagcgaaggaacttcatccccttctggaaaccaatcagggtggcattggcatgat
gcttcagttgagaaagacattaaagtcacatctgatgtccttggatctagagtcagaaag
tcattgtcactggaaagtgtcaccccattcgtttggtcagggacgagctctaccagcatc
caaattcaacctatgtccaaaactgaaattcctcttcagatttgtgtgttctctgctggg
atatatgatctgtcaaactatgttttgcaatggaatcttctatcatccgagggtccggaa
agtctggagggaacaagacagtcatcaggtacatgccaagggtatccatattatcttagt
gtgctccaatcatcttaa
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