Quercus lobata (valley oak): 115963130
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Entry
115963130 CDS
T07350
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115963130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115963130
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115963130
03036 Chromosome and associated proteins [BR:
qlo03036
]
115963130
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115963130
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115963130
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115963130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
Adaptin_N
CLASP_N
Cnd1
TAF6_C
Motif
Other DBs
NCBI-GeneID:
115963130
NCBI-ProteinID:
XP_030937884
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Position
10:complement(25022852..25037496)
Genome browser
AA seq
608 aa
AA seq
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MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLSTVEETCVRDKAVESLCRIGAQMREQ
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRTIYSQLCQDDMPMVR
RSAATNLGKFAATVEASHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVS
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQV
LDMINNPHYLYRMTILHAISLLAPVMGSEITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLIELSEDPDVDVRFFATQALQSSDQENKQVARSTMLRHSTLEL
GREGMYEV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccatgattgatgagccactctatccgattgctgtcttaattgatgagcttaaaaat
gaagatattcagctccggctgaactcgatccgccggctctccacgattgcgcgtgcgctc
ggagaggagaggaccaggaaggagctgattccttttctcagcgagaacaatgacgacgat
gatgaagtgcttcttgcaatggcagaggaattaggggtttttataccctatgttggaggt
gttgagcatgctaatgtgctgctcccgccgttggaaacgctctccacggttgaggaaact
tgcgttagagacaaagcagtggagtcgttgtgtagaatcggggcgcagatgagggagcag
gacttggttgagtacttcatccctctggttaagagactggctgctggtgagtggtttaca
gctcgagtttcctcatgtggcttgttccatattgcttacccaagtgccccagagacttta
aaaactgaattacgaacaatttacagtcagctgtgtcaagatgacatgcctatggttagg
agatctgctgcaacaaacctgggtaaatttgctgctactgtcgaagcttcccatttgaaa
accgacatcatgtctatatttgaggatctgactcaggatgatcaagattcagttcggtta
ttggcagttgaaggttgtgcagcacttggaaagctattggaacctcaagattgtgtgtca
catattcttcctgtcattgttaatttctcacaggacaagtcttggcgtgttcgttacatg
gttgcaaatcaactatatgaactatgtgaagctgtaggtcctgaacctaccagatcggac
ctggtacctgcatatgttcgtctacttcgtgataatgaggctgaagtacgtatagctgct
gccggaaaagttaccaagttttgccggattttgaatccagaacttgcaattcagcatatc
cttccttgtgtgaaggaactgtcaacagattcatctcagcatgttcgttctgcattggct
tcagttataatgggaatggcaccagttctgggaaaggacgcaacaattgaacagctgctt
cctatattcctttctcttctaaaggatgagtttcctgatgtccggctcaatattatcagc
aagcttgatcaagtgaaccaggtaattggaatcgatctgctgtcccagtctcttttgcca
gcaattgtggagcttgcagaggatagacactggagggttcggcttgcaataatagaatat
atacctttgttggcaagtcaattgggtgtaggattttttgatgacaagcttggtgctctt
tgcatgcaatggttaaaagataaggtttactcaattcgagatgcggccgcaaataatgtg
aaacgccttgcagaagagtttggccctgagtgggcaatgcagcacataattccacaggtt
ttagacatgattaacaatccacactatttgtaccggatgactattctacatgcaatttct
ctattagctcctgtaatgggatcagaaattacttgttccaaacttttgcctgtggtcatt
aatgcatcaaaagatagggttcccaacatcaagttcaatgtggctaaagtgttgcagtca
cttattcccatagttgatcagtctgtggtggagaagacaatccgtccatgtctgattgaa
cttagtgaggacccagatgttgatgtgaggttctttgccacccaagcactacagtcaagt
gatcaggaaaacaagcaagttgccaggtcaaccatgctcagacacagtaccttggaactt
ggaagagaaggcatgtatgaagtatga
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