Quercus lobata (valley oak): 115964922
Help
Entry
115964922 CDS
T07350
Name
(RefSeq) TMV resistance protein N-like
Organism
qlo
Quercus lobata (valley oak)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
LRR_4
LRR_8
TIR_2
LRR_1
AAA_16
LRR_3
ATPase_2
Rad17
C-JID
AAA_14
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
115964922
NCBI-ProteinID:
XP_030940009
LinkDB
All DBs
Position
10:complement(51120356..51126325)
Genome browser
AA seq
1074 aa
AA seq
DB search
METQTASSSSSSSYWKYDVFLSFRFKDVRMGFISHLFAALEQKGIINYRDDENLPRGKYI
IPELLKVIEETKFAVVVLSTNYTSSVWCLAELAKIVECMKQNKLTILPVFYHVNPSDVRN
QMGILATRKRTFAEAFAEHERDPKVKIEDLQAWKAALKEVGNISGWHVQQHSSEAEVIQE
IVQRVLGELNLILSRTISKDLKLVGIESRVREVLDLYVDERSGGVRFVGICGMGGIGKTT
LAVEIFKRISGSFEASSYIADVREKTENQHLVSLQKQLLSNIFMESEIKIWNVHEGVNII
GNRLRGKKVLIVLDDVEDQKQLEALAGNLDWFGPGSRIIVTSRDSQLLKICGVNYIYAAK
GLNPDEALQLFSLSAFKKPHPKENYVDLCMYFVNYTKGLPLALKVLGSLLFTKSIDEWES
LIDKLKVEPEKKILDILQISFDGLMETQKELFLDIACFFKGENKDCIRETLKSFDYYPDY
NIGVLMDKSLITINENGALWMHDLIQEMGQDIVRRGSKEPGRRTRLWLYEDVLHVLKNNT
GTKEVEGIMLNAPIQKEEHLGAEVFSKMKKMRLLKVGDMGNVKLLQGLNCLSNELRILEW
HGYPLSSIPTNFQPNKLVELKMHCSSIKRIWTGIMILDELKLIDLRNSQNMIETPNLSGV
LNLKQLILQGCTALSKIHPSLGNLKQLIRLDLSGCNCLESLPHKINLESLEVIILSGCSR
LKKFPEVVGNMPCLSELYLDETAIKDLPLSVERLTGLVKLDLRDCKNLSNLPNACYSLMS
LKILTLSGCSKLEELPENLENLKGLEELDLSGSAIKVLPTSIKLLKNLKELSLRGCKGLS
FKSSNKLFSFSFMQPRRSPDLMAMLECSLSGLWSLTKLDLSHCNLQAIPDAFDYLSSLSI
LNLEGNEFIWLPKSMIQLSNLQDLFLRGCSNLRSLPKLSSNIKYIDATQCTSLETLSLGS
EYDFRPALQLLNCVKLIENQGYGYMSTMLSRYFINDKHYYGQDRLAHYIYVPGGEIPKWF
RHQNVGASDWRLQNAGPIWYSSKSLKISNKLWLGLAAAASLLMRMILTVQPEIP
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcaaacagcttcttcctcctcctcctcttcttattggaaatacgatgtgttc
cttagttttcgctttaaggacgtccgcatgggttttatcagccatctcttcgctgctttg
gaacaaaagggtattatcaactacagagacgacgaaaaccttccgcgtggaaaatatatt
ataccagaactcttaaaagtaatagaagagaccaagtttgcagtcgtcgttctctcaaca
aactacacttcttcggtgtggtgcttggctgaactagcaaagattgttgaatgcatgaaa
cagaacaagttgacaattttaccagtcttttaccatgtgaatccctctgatgtacggaac
cagatgggtattcttgctacacggaaacggacttttgctgaagcctttgctgagcatgaa
agagatcccaaagttaaaattgaggatttgcaagcatggaaagctgctttgaaagaagtc
ggcaatatatctggatggcatgtacaacaacacagttctgaagcagaagttatccaagaa
attgttcaaagggtacttggagaattgaatcttatattatcaagaactatttccaaagat
cttaagcttgttggaatagaatcccgtgtgagggaagtgttggatttatatgtagatgaa
aggtcgggtggtgttcgctttgtaggaatttgcgggatgggtggaattggtaaaacaact
cttgctgtagaaatttttaaaagaatttcaggtagttttgaagctagtagctatattgct
gatgtaagagaaaaaactgaaaatcaacatctagtttcattacaaaaacaacttctttct
aacatctttatggaaagtgaaataaagatatggaatgttcatgagggggtcaatatcata
gggaatagattacgtggtaagaaggttcttattgttcttgatgatgttgaggaccaaaaa
caattagaagctttggctgggaaccttgattggtttggtccagggagtagaatcattgta
acaagtagagatagccaattgttgaaaatatgtggtgtgaattacatatatgcagcaaag
ggtttgaatccagatgaagctttgcaactctttagtttgagtgctttcaagaaaccccat
cccaaagaaaattatgtggatttgtgtatgtattttgtgaattacactaaaggccttcct
ttagctcttaaagttttaggttctttgttatttaccaaaagcattgatgaatgggaaagt
ctcatagataaactaaaagtggaacctgaaaaaaaaattctggacattcttcaaataagt
tttgatgggctaatggaaacccaaaaagaattatttctagatattgcatgttttttcaaa
ggagagaacaaagattgcataagagagacattaaaaagttttgattactatccagactac
aatattggtgttttgatggacaaatcgctcataaccattaatgaaaatggagctttgtgg
atgcatgatttaatacaagaaatgggtcaagatatagttcgtcgtggatctaaagagcct
ggtagacgtactaggttatggctttatgaggacgtccttcatgtattgaagaataatact
ggaacaaaggaagttgaaggcataatgctaaacgcacctattcaaaaagaggagcacttg
ggtgctgaagtcttctcaaagatgaaaaaaatgagattgcttaaagtgggtgatatgggt
aatgtgaaacttctgcaaggcctcaattgtctttctaatgagttacgcattttagaatgg
catggatatcctttgagttccatcccaaccaacttccaacctaataagcttgttgaattg
aaaatgcattgtagcagcatcaaacgaatatggactggaattatgattttagatgagtta
aaactcattgacttgcgtaactctcaaaacatgattgagaccccaaatctaagtggagtc
ctaaatcttaagcaattgattcttcaaggttgtacagcactgtctaagattcatccatct
cttggaaatctcaaacagcttattcgattagatctgtctggttgcaactgtcttgaaagc
cttcctcacaagatcaacttggaatctcttgaagttattattctttccggctgttcaaga
ctaaagaagtttccagaggttgtaggaaatatgccatgtttgtctgaactttatttagat
gagactgctataaaagatctaccattgtcagtggagcgtttaactggccttgttaaattg
gatctaagagactgcaaaaacctttcaaatcttccgaatgcttgttatagtctgatgtct
ctaaaaattctcactttatctggctgctcaaaacttgaagaactaccagaaaatttggag
aatctcaaaggcttggaggagttagatctgagtggatctgctataaaagtgctacctaca
tcgatcaaactcttaaaaaatctcaaagaactgtctcttcgtgggtgtaaagggctatca
tttaaatcttcaaataaactcttcagtttttctttcatgcaaccaagaagaagtccagat
ctcatggccatgttagagtgttctttatcaggcttatggtccttgaccaaactggaccta
agtcattgcaatcttcaggcaattcctgatgcttttgattacttgtcgtccttgtcaata
ttaaatctagaaggaaatgaatttatttggcttcctaaaagtatgattcaactatcaaat
ctacaagatctttttctgcgtggttgctcgaatcttcgatcattgccaaagctttcatca
aacattaagtatattgatgcaacacagtgtacctcactggaaacattatcattaggatca
gaatatgattttcggccagcacttcagcttctgaattgtgtcaaattgattgagaatcaa
ggctacggttacatgtcaacaatgctaagtcgttattttattaatgacaagcattactat
gggcaagacagattggcacattatatctatgttcctggaggtgaaattccgaaatggttt
agacaccaaaatgtgggggcttcagattggaggttacaaaatgcggggcccatttggtat
tcaagcaagtcattgaagatctcaaacaaactatggttgggtctagcagctgcagcatca
ctccttatgaggatgattttgacggttcagccagagataccataa
DBGET
integrated database retrieval system
