Quercus lobata (valley oak): 115968609
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Entry
115968609 CDS
T07350
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115968609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115968609
03051 Proteasome [BR:
qlo03051
]
115968609
Membrane trafficking [BR:
qlo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115968609
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115968609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Ubiquitin_2
XPC-binding
Ubiquitin_5
Rad60-SLD_2
Dsc3_N
HOIP-UBA
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
115968609
NCBI-ProteinID:
XP_030943897
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Position
11:55897035..55901923
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AA seq
564 aa
AA seq
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MGAEGDSSEARVSVGVGGEEEQREEVVINIRCSNGTKFTVRTSLDSSISAFKAALAQNCD
VPADQQRLIYKGRILKDDQTLESYGLQAEHTVHMVRGFASAASTPAGTATATTAAATGNS
ESLNNTPGVTRGVGSNEGGGLGNAGLGASLFGLNALGSGGEPGLFGAGLPEFEQVQQQLT
QNPNMMREIMSMPAIQSLMNNPELMRSLIMSNPQMRDIIDRNPELAHVLNDPGILRQTIE
AARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYENVQEPFLNATTMGGNAGNDLGSN
PFAALLGNQGGTQVRDGSNNPSTTGSETTTGLTSPNTNPLPNPWNNTGGGTQTTTTRPNP
AGDARAPGIAGLGGLGLPEMEQMFNGIPDSTLLNQFMQNPAVSQMMQSLLSNPQYMNQIL
SLNPQLRGMVDTNPQLREMMQNPDLLRQLTNPETMQQMLALQQSLLSQLNQRQSTQDQAQ
TGGNTGAPNAAALELMMNMFGGLGAGSLSVPNNPDVPPEELYATQLSQLQEMGFFDTQEN
IRALRATSGNVHAAVERLLGNPGQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgagggcgattcgagcgaggcgagagtgagtgttggtgttggtggtgaagaa
gagcaaagagaagaggttgtaatcaatatcaggtgctcgaatggtacgaaattcacggtg
aggacgagcctcgattcttcgattagtgcattcaaggctgctttggctcagaattgcgat
gtaccagctgatcagcagaggttgatttacaaaggtcgcatcttgaaggatgaccaaacc
ctagaaagctatggtttgcaggcagaacacactgttcacatggttcgtggttttgcttca
gctgcgtcaacacctgctggtactgccactgctactactgctgctgccactggtaattca
gaaagtctgaacaatacgccaggtgttacacggggtgttggttcaaacgaaggcgggggc
ttgggaaatgctggtcttggtgcatctttatttggtctcaatgctctaggaagtggagga
gaacctggcttatttggagctgggctgccagaatttgaacaagtgcagcaacaactgact
cagaacccaaatatgatgagggaaattatgagcatgcctgccattcagagcctaatgaac
aaccctgaattaatgcgcagcttgattatgagcaatcctcagatgcgtgatatcattgac
cggaatccagagcttgctcatgtgcttaatgaccctggtattctccgacagactatagaa
gctgcaaggaaccccgagctcatgcgtgagatgatgcgaaacacagacagggcaatgagc
aacattgaagcttcccctgagggatttaacatgcttagacgcatgtatgaaaatgttcag
gaaccatttctgaatgctacaacaatgggtggaaacgctggaaatgatttgggttcaaac
ccatttgcagcactgttggggaaccaaggtgggacacaagtgagggacgggtcaaataat
ccttcaactactggttctgaaaccactacaggacttacttctccaaatacaaacccactt
ccaaacccttggaacaatactggtggaggtactcagacaacaactacaaggccaaatcct
gctggggatgcaagggcacctggtattgctggtcttggagggcttggtctccctgagatg
gaacagatgtttaatggtatcccagattctaccctactcaatcaatttatgcaaaatcca
gctgtatcacagatgatgcaaagcttgctctccaatccccaatatatgaatcagattctc
agtctcaaccctcaactgcgtggcatggttgatacaaatcctcaattaagagaaatgatg
caaaatccagatcttctacgtcagttaactaaccctgagacaatgcagcaaatgctagct
ttacagcagtcacttctgtctcagctcaatcaacggcaatcaacccaggatcaagctcag
actggtgggaatacaggagcacctaatgctgctgcattggagttgatgatgaacatgttt
ggtggtcttggagctggcagcttgagtgttccaaataaccccgatgtacctccggaagaa
ctgtatgcaactcagctttcacagcttcaagaaatgggtttctttgatactcaagagaat
atcagggcactgcgtgctacgtctgggaatgtccatgctgcagtagagcgacttctgggg
aatcctgggcaataa
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