Quercus lobata (valley oak): 115970736
Help
Entry
115970736 CDS
T07350
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115970736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115970736
Spliceosome [BR:
qlo03041
]
Common components
Common spliceosomal components
SR proteins
115970736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115970736
NCBI-ProteinID:
XP_030946199
LinkDB
All DBs
Position
12:28553510..28558934
Genome browser
AA seq
304 aa
AA seq
DB search
MSSRASRTLYVGNLPADIREREVEDLFYKFGRIAHIDLKVPPRPPGYAFVEFEDPQDAED
AIRNRDGYDFDGHRLRVELAHGGRGHSSSRDRYSSYSSGRSGRGGVSRRSEFRVLVSGLP
PSASWQDLKDHMRQAGDVCFSQVFRDGNGTTGIVDYANYEDMKYALKKLDDSEFRNAFSR
AYVRVREYDSRRDSSRSPSRGRSYSRGRSYSRSRSHSRSRGRSLSKSPKTKPSRRSPVKS
RSRSASRSRSASKPRSLSGSRSRSRSPLPSRPKRMSKSPKKRSPSRSPSRSRSRSKSLSR
SPMR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtgcgagccgaaccctctatgtgggtaatcttccagctgatattcgtgaa
agagaagtggaggatttgttttacaagtttggacgcatagctcacattgatctgaaggtc
ccgccaaggcccccaggttatgcatttgttgagtttgaagatcctcaagatgctgaagat
gccattcgcaaccgtgatggctacgattttgatgggcatcggctacgggtggaacttgca
catggtggccggggacattcatcatcaagagatcgctatagtagttatagcagtggtcgg
agtggacgtggtggagtatccaggcgctctgaatttcgtgttcttgttagtggattgcct
ccttctgcttcatggcaagaccttaaggatcacatgcgacaagctggggatgtttgtttt
tcccaagttttccgtgatggtaacggcacaacagggattgtggattacgcaaactatgaa
gacatgaagtatgcactaaaaaaacttgatgattctgagttccggaatgcattttctcgg
gcatatgttcgagttagggaatatgattcaaggagggattcctctaggagccctagtcgt
ggtcgatcttactcaagaggcaggagttacagccgtagtcgtagccatagtcgtagccgg
ggcaggagcctgagcaagtctccaaaaaccaaaccttcgcgccgctcacctgtcaaatct
cggtcgaggtctgcttctcgctctcgctctgcttcaaagccgcgttctttgtctggatca
cgatcaaggtccagatctccattgccttcgcgtccaaaacgtatgagtaaaagcccaaag
aagcgcagtccaagcaggagcccaagcaggagcaggagcaggagcaagagtttatccagg
tctcctatgcgctaa
DBGET
integrated database retrieval system
