Quercus lobata (valley oak): 115972178
Help
Entry
115972178 CDS
T07350
Name
(RefSeq) 4-coumarate--CoA ligase-like 6
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00130
Ubiquinone and other terpenoid-quinone biosynthesis
qlo00940
Phenylpropanoid biosynthesis
qlo01100
Metabolic pathways
qlo01110
Biosynthesis of secondary metabolites
Module
qlo_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
qlo_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
115972178
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
115972178
Enzymes [BR:
qlo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
115972178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
IHHNV_capsid
Motif
Other DBs
NCBI-GeneID:
115972178
NCBI-ProteinID:
XP_030948219
LinkDB
All DBs
Position
12:complement(368238..372333)
Genome browser
AA seq
551 aa
AA seq
DB search
MTIKNPKPHPQWYSPETGIYSSTFPNRYVPSDPFLDVVSFIFSHKHRGFSALIDSSTGSS
ISYPELYPLVQAMASGLYHSMGVRQGDVVLVLLPNSIYYPIVFLGIASLGAIATTMNPLS
STPEIKKRITDCNASLAFSAAEKVDTLQALGVPAIGVPDNVNLDRKKTSFSAFYKLISGD
FDLPPKPVIKQQDTVALIYSSGTTGVSKGAMLTHGNFIAMVELFIRFEASLYPYEAVDNV
HLAVLPMFHIYGLALFVLGLFSVGSSIVVVKKFDLNEVMKAIDRYKVTHFPLVPPILTAL
TTKAKDSGGSSFKSLKQVSCGAAPLSSIKVVEDLKQALPHVDFIQGYAMTESAGVGTRGF
NTEKIRNYTSIGLLAPNTQAKVVDWNTGSSVPPGSTGELWLRGPGIMKGYLNNVEATMAT
VDKDGWLHTGDIVSIDHDGYIFVQERLKEIIKYKGFQIAPADLEAVLISHPEILDVAVTA
ILDEKSGEIPVAFVVKKHGSKLSEAAVIDYVAEQVAPYKKVRKVVFTNSIPRSAAGKVLR
RQLRSNMASRL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaaaacccaaaacctcacccacaatggtactcgccagagactggaatctac
tccagcacgttccccaatagatatgtcccctcagatccttttcttgatgttgtttccttc
atcttctcccacaaacacagagggttctcagctctcattgattcctcaactgggtcttcc
atttcctacccagaactctaccccttggtccaagccatggcctctggcctctaccacagt
atgggtgtcagacaaggtgatgtggttttggttttgttgccgaattccatttactaccct
attgttttcttgggtattgcgtctttaggtgcaatcgctacaaccatgaatcctctcagt
agtacaccagaaattaagaaacggataactgattgtaatgcgtccctagctttctctgca
gctgaaaaagttgacacattgcaagcattgggtgttcctgcaattggggtaccagataat
gtgaatttggataggaagaaaactagtttttcagctttctataagctcatttctggtgat
tttgatttgcctcctaagccggtgattaagcagcaggacactgtggctttaatttattcc
tctgggactactggggtgagcaaaggtgctatgctaacacacgggaattttatagcaatg
gttgagctttttattcgttttgaggcttcactgtacccgtatgaggctgtggataatgtg
catttagctgttttaccaatgtttcatatatacgggctggcactatttgtgttaggattg
ttctctgtgggttcttcaattgttgtggtgaagaaatttgatttgaatgaggtgatgaag
gccattgatagatataaagtcacacactttccacttgtcccaccaatattgacagctttg
acgacgaaagcaaaggattctggtggaagtagtttcaagagtttgaagcaggtttcctgt
ggggcagctcctctgagtagtataaaagtcgtagaggacttaaagcaggcattgcctcat
gttgatttcattcagggttatgcaatgactgagtcagctggagtaggaacccgcggcttc
aatactgaaaagattcgaaattatacttcaataggactattggctccaaatacgcaagct
aaagtggtagattggaataccggttcctctgtgcctcctggcagtactggtgagctttgg
ctacgaggacctggaatcatgaaaggatatttgaataatgtggaggcaactatggcaaca
gttgataaagatggttggctacatactggagacattgtttctattgatcatgatggatac
atttttgtacaagaacgattgaaagagattatcaaatacaagggctttcagattgctccc
gctgatttagaagctgtgttgatctcccatcctgagatacttgatgttgcagtcacagct
atcttggatgaaaaatctggggagataccagtggcatttgtagtgaagaagcatggaagc
aaactttctgaggcagctgttattgattatgtcgctgaacaggttgcaccatacaagaaa
gtcaggaaggtggtctttacaaactccataccaagatctgcagcaggaaaggtccttcga
aggcaactcaggagcaacatggcttctagactctga
DBGET
integrated database retrieval system