Quercus lobata (valley oak): 115976922
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Entry
115976922 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP214-like
KO
K14317
nuclear pore complex protein Nup214
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115976922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115976922
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115976922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115976922
NCBI-ProteinID:
XP_030954347
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All DBs
Position
1:7871008..7911414
Genome browser
AA seq
1650 aa
AA seq
DB search
MEVEPSFSCSVDETSFVKDFRWRKKSENSYVVLSNSGKLYHGAVDGPFKEVMDNVDAVEW
SEKGKFVAVARKNVLSIMSSRFKERFCMSLSFKSLIGDSDCSAKVDSIRWVRPDCIILGC
FRLSANGQEENFIVQVIRNKERKITDASFEPVVQSFDYLFEGFYDDILPFGIGPRLFLSY
LKQCELTITANRKNTEMHIVFLGWSLGDKLDEVAVIDIEQEKWKPKIGLQDNGDDNLILG
HCVDKVSLYEKVKIQLGVDERIELSPYCILLCLTLEGKLVMFHVASTRETAVPLEVISAP
SEEEDEVVDTHAAVPVQCDLSKSSLGLDKPESEHVSLGFQFQEGNKKELNMKEVGEIFKR
TDPKPSDSVSPVVASPVSFNESLLKNRKVESQINSLSSQADRQQTVPVTKLFQDTDGQPI
QPSSQQSTKLDQSPNKASFNMVSDLSKTGTQKIESDPAFGVNSPADIPGQSDHKNLSNSV
GTSEEFLGNIRSTSLQSASSLSRSSGNIVFPKDSNARSSLFPSGSIEGNRTENSGLSYGA
SNVSGGLAVKPFHLEDSIGTSTSVNSSGRPVQIGGQRTSVGAGNIESSPSVHSLQMSSQE
KFALGKYGNHNVHPSKENNRTQPPSAMLNSEPNSSKQFGNINELTKELDTLLESIEAEGG
FRDGCTINQKSSVEALEEGVRTLCEKCGIWKSIMDERLGEIQNLLDKTVQVLARKIYMEG
IVKQAFDSRYWDLWNRQKLSSEHEMKRHHILQMSQDLTNQLIELERHFNNLELNKFSENG
GSHVGWRAQQSKFRPSRQTQSLHSLLSTMSSQLAAAEQLSECLSKQMAVLNIGAPVKQQN
VKKELFETIGIPYDASFSSPDATKVSDTPSTKKLLHSSGSTAAKDESRRKQLSAMKSSEP
ETVRRRRDSLDRSWAKFEPSKTTVKRILLQEHRKASMNGSSFPVNKQHFNLHMLNVSAAE
RPLVRITPSTYSSQDKGIQDTSTKQFSKNLIQFIQANELPAPSQSVGLKFPTLQTDNVSA
LSFLSASEFSPVIGKDCPRETRDITIGHSFCEITYNPGSVPLNEAKSMVQSETNQHQKPS
ISTMFPTQTVSLLKKSGEMFNSSSKETTLASTIGTIKDKASTTKSSLFESGENYDSPFSS
TFDVSAVSTPSGKFQFPAGKSEPGENVLVSSTSLVLSAPSSPMIKSMTVPQSSSATPTFL
SPMPLSRPFTTSNASADANLTVPTSSSSASPSLITSSSGSPSLQAAKTLVPLSTPISESP
KTELQHPMAKSSLKTDKDASKQVSSLQSEPPKGEIKSKLEPSVTTDPTIEISTSLTSGSQ
PSFGNMANPAPNVTLNAQPAQPSTARVLFPTSGSTTGEKNESLDVAETEEDEMEEEAPET
SNTAELSLGSLGAFGIGSTPTATAPKSNPFGGPFGNASSSPMSSAFDMTVPSGQLFRPAS
FSFQSPQSSQPSQPTNSSAFSGGFSTGTTAQAPTQTAFGQPAQIGSGRQALGSVLGSFGQ
PRQIGTSLPGTGFGSPSGFGGGGFTGTSSPGGFSSAATGGGFAGISSTGGGFAGVASGVA
GFASVASAGGSGGFSGGGFAGALSAGGGFSGAPAAGGGFASAPAAGGGFAGAPAAGGGFG
AFNSEQGSGFSAFRGWRTGKPTELFTQIRK
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaaccgtctttctcttgctctgttgatgaaacgagctttgtaaaagacttc
agatggagaaaaaagtcagaaaattcttatgttgttctttcaaattctgggaagttatat
catggagccgtggatgggccgtttaaagaagtaatggataatgttgatgctgttgaatgg
agtgaaaaaggaaagtttgttgctgtggcaaggaaaaatgtccttagcatcatgtcctca
agattcaaggagcggttctgtatgtcactatcatttaagtcattgattggtgattctgac
tgtagtgcaaaagtggattctatcaggtgggttcgtccagattgcattattctaggatgc
tttcgactttctgcaaatggccaagaggaaaatttcattgtccaagttatcagaaacaaa
gaacgcaaaattactgatgcttcttttgagccagttgtacaatccttcgattatttgttt
gaaggtttttatgatgacattttaccctttggaattggaccgcgcttattcttgagctat
ctaaaacaatgtgagctcacaattactgctaacaggaagaatacagagatgcatattgtg
tttcttggttggtcactaggtgacaagctcgatgaagttgcagttattgatattgaacaa
gaaaaatggaaaccgaagattgggcttcaagataatggtgatgataatttgatcctgggg
cattgtgtcgacaaagtttcactgtatgagaaagtcaaaatccaacttggagtggacgaa
cgtatagagctctcaccatattgcattcttctatgccttacgctggaaggaaagcttgtc
atgttccatgtggccagtacaagagaaactgcagttccactagaggttatttctgcccct
tctgaggaggaagatgaggtagtggatactcatgcagcagtacctgtacaatgtgatcta
tccaaatcttcacttggattggacaaaccagaatcagagcatgtgtctttgggttttcag
ttccaggaggggaacaaaaaggaactcaacatgaaagaagttggtgagatttttaagaga
actgatccaaagccttctgattcagtgtctccggttgttgccagtccagtatcctttaat
gaaagtttattgaagaaccggaaagttgaatcccagataaattcattgtcctctcaagct
gatagacaacaaactgtacctgttacaaagctgttccaagacacagatggtcaaccaata
cagccttccagccagcaaagcacaaaattagaccaatcacctaataaagcttcttttaac
atggttagtgacttaagcaagaccggaactcaaaaaattgaatctgaccctgcttttgga
gtaaatagtccagctgatatccctgggcaatcagatcataagaatttatcaaatagtgtt
gggacaagcgaggaatttctaggaaatattagatcaactagcttacagagtgcttcatct
ctgtcacggtcaagtggaaatattgtctttccaaaagacagtaatgcaagatcctcactt
tttccttcaggttctattgaaggcaaccgaactgaaaactctggcctttcttatggtgct
tcaaatgtttctggaggcctagctgttaaaccttttcatttagaggattccatcggtaca
tcaacttcagtaaattcttctggtagaccagttcagattgggggacagagaacttcagta
ggggcagggaatattgaatcatcaccttctgttcatagcttacaaatgtcttcacaggaa
aagtttgcattgggaaagtatggcaaccataatgttcatccttccaaggaaaataacagg
actcagcccccgtcagccatgctgaattctgaaccaaactcatcaaaacaatttggaaat
ataaatgagctgaccaaagagcttgatacacttttggaatctatagaagccgagggtggt
ttcagggatggctgcaccatcaatcagaaaagttcagttgaagcattggaggaaggcgtg
aggaccctttgtgagaaatgcggaatatggaagagcataatggatgaacgacttggtgag
atccaaaatcttcttgataaaactgtacaagttttggcaaggaaaatatacatggaaggc
attgttaagcaagcttttgatagccgatattgggacctctggaatcgccagaagttgagt
tctgaacatgagatgaagcgtcatcatatattacaaatgagtcaggatttgaccaatcaa
ttaattgaattggaaaggcatttcaacaaccttgaactcaataaatttagtgaaaatggt
ggatctcatgttggttggagagctcaacagagtaaatttaggccttcaagacagactcag
tccttgcatagtttactcagcacaatgagttcacaattagcagctgctgagcaactttct
gaatgtctgtcaaaacaaatggcagttctaaatataggagcacctgtaaaacaacagaat
gtaaaaaaggagttgtttgaaactatagggatcccctatgatgcctctttcagctctcca
gatgcaacaaaagttagtgataccccttcaactaagaaactcttgcattcttctggttct
actgctgctaaagatgaatctcggagaaaacaattgagtgctatgaagagttctgaacca
gaaacagtgaggaggaggagagactcgttagatcggagttgggctaagtttgaaccttca
aaaacaactgttaaacggattcttttgcaagaacaccgcaaggcaagcatgaatgggtca
tcctttccagtaaataagcagcattttaaccttcacatgcttaacgtttcagcagctgag
cgcccactggttcgcataaccccttcaacctattcgtctcaagacaaaggcattcaggat
acatctacaaaacaattctctaagaacttaattcaattcatacaggcaaatgagcttcca
gcaccatcacaatctgtggggctaaagtttcctacattgcaaacagacaatgtttcagca
ttgtcatttctgtcagcgtctgaattttcacctgtaataggaaaagattgcccgagggaa
actcgcgatatcaccataggacattccttctgcgaaataacttacaatcctggttcagtt
ccattaaatgaggccaagtctatggtgcagtctgaaactaaccaacatcaaaagccatcg
atatccacaatgttccccacacaaacagtgtcattgctgaagaaatccggtgaaatgttt
aattcaagtagtaaagaaacgacgcttgcttccacaattggaactattaaggataaggct
tcaactacaaaaagttcactttttgaatctggagaaaattatgactctccgttctcttcc
acatttgatgtttctgcagtgtccaccccgagtggaaaatttcaatttcctgcaggcaaa
agtgagcctggtgaaaatgtgctagtttcttctacttctttggtactttcagctccatca
tctccaatgatcaagtcaatgacagttcctcaatcctcatcagctactccaaccttttta
tctccaatgcccctgagcagacctttcaccacttctaatgcaagtgcagatgctaaccta
acagtgccaacatcctcatcatcagcttccccttctttaattacctcttcctctggttcc
ccttccttgcaggctgctaaaacattggtgcccttatctactccaatatccgagtcccct
aaaacagagcttcaacatcctatggccaaatctagtttgaaaacagacaaggatgctagt
aaacaagtatcatctctgcagtctgagcctcccaaaggtgaaattaaatcgaagcttgaa
ccttcagtaacaactgaccctacaattgaaatttcaactagtctgacatctggaagccag
cccagtttcggtaacatggcaaaccctgcacctaatgtgacattgaatgctcaaccagca
cagccatctactgcacgtgttctattcccaacttctggaagcacaactggagaaaagaat
gaaagtttggatgttgcagaaacagaagaggatgagatggaggaggaggctcctgagaca
agtaacacagcagaacttagtttgggaagccttggtgcatttggtattggctcaacccct
actgcaactgctccaaaatcaaatccatttggtggtccatttggtaatgcatcatcaagt
ccgatgagctcagcatttgatatgacggttcctagtggacagctgtttcgtcctgcatct
tttagcttccagtctccgcagtcttcacaaccatctcaaccaacaaattcgagtgcattc
tctggtggtttcagtactggaacaacagctcaagctccaactcaaactgcctttggccag
ccagcacagattggatcaggacggcaagcactgggatccgttcttgggtcttttggacag
ccaagacagattggtaccagtctaccaggtacaggttttggatctcccagtggttttggt
ggtggtggcttcaccggcactagttcccctggtgggttttcaagtgctgctactggtggt
ggctttgctggtatatcatctaccggtggtgggtttgctggtgtggcttcgggggttgcc
ggatttgcaagtgtagcttcagctggtgggtctgggggattttctggtggtgggtttgct
ggtgctctctcagctggtggtggattttccggtgctcctgcagctggtggtggatttgcc
agtgctcccgcagctggtggtggatttgccggtgctcccgcagctggtggtggatttggg
gctttcaacagcgaacaaggaagtggtttttctgctttcagaggatggaggaccggaaaa
cctaccgagctctttacacagattagaaaatag
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