Quercus lobata (valley oak): 115982069
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Entry
115982069 CDS
T07350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115982069
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115982069
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115982069
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115982069
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115982069
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115982069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
GMP_PDE_delta
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
115982069
NCBI-ProteinID:
XP_030960429
LinkDB
All DBs
Position
1:18848407..18872620
Genome browser
AA seq
1118 aa
AA seq
DB search
MTVMTPAPIDQQEDEEMLVPHSDLAENNHQPMDVVAQTETASTVENQPVEDPPSSRFTWR
IDNFSRLNAKKVYSEVFVVGGFKWRVLIFPKGNNVDHLSMYLDVADSQSLPYGWSRYAQF
SLAVVNQIHHKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDSVIIEAEVL
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDLPSA
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEHYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLVEQIGRDIYFDLVDHDKVRSFRI
QKQMPFNLFKEEVAKDFGIPVQFQRFWLWAKRQNHTYRPNRPLTPIEETQSVGHLREVSN
KVHNAELKLFLEVEHGLDLRPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKP
LEILTKLNEMAGYTPDEEIELYEEIKFDPHVMCESVDKKCTFRGSQLEDGDIICFQKSSP
VEGGEQLRYPDVPSFMDYVHNRQVVHFRALDKPKEDDFCLELSKLHTYDDVVERVAQQLG
LDDPSKIRLTPHNCYSQQPKPHPIKYRGVEHLSDMLVHYNQTSDTLYYEVLDIPLPELQG
LKTLKVAFHHATKEEVVVHTIRLPKQSTVGDVINDLKTKVELSHPNAELRLLEVFYHKIY
KVFPPSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEP
FFLVIHEGETLAEIKERIQKKLQIPDEEFAKWKFAFLSLGRPEYLQDSDIVSNRFQRRDV
YGAWEQYLGLEHSDNAPKRAYTSSQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactcctgctcctattgatcaacaggaggatgaggagatgctcgtgccg
cactccgatttagctgagaacaatcaccaaccaatggatgttgtagcacaaactgaaact
gctagtactgtggagaaccagccagtggaggatcctccatcatcgaggttcacgtggagg
attgacaacttttctaggctgaatgcgaagaaggtctattcagaagtatttgttgttggt
ggttttaaatggcgtgtgcttattttcccaaagggaaacaatgtggaccacttgtctatg
tatttggatgttgccgattcacaaagtttgccttatgggtggagtagatatgcacagttt
agcttggccgtggttaatcaaattcatcataagtactcagtcagaaaagacacacagcat
cagttcaatgcgcgagaaagtgattggggcttcacgtcctttatgcctcttggcgaacta
tacgatcctagtagaggttatcttgtcaatgattctgtcataattgaagctgaggttcta
gttcgtagggttgtggattattggacttacgactcaaaaaaggagactggttatgttgga
cttaagaaccaaggagcaacatgttacatgaactcacttctccaaactctattccatatt
ccttattttaggaaggctgtgtaccatatgcctacaactgaaaatgatttgccatcagct
agcattcctttggctctgcagagcctattttacaagctccagtacagtgacaacagtgtt
gcaacaaaagagctgaccaagtcttttggatgggacacatatgattcttttatgcagcat
gatgtgcaagaacttaatagggttctttctgaaaaacttgaagacaaaatgaagggaact
gttgtagagggaacaatacagaagttatttgaagggcatcatatgaactacattgaatgc
attaatgtggattacaaatcaacaagaaaggaatcattttatgatcttcagcttgatgtc
aaaggttgtcgggatgtttatgcctcatttgataaatatgtggaagtcgaacgtcttgag
ggtgataataaatatcacgctgaacactatggattgcaggatgctaagaagggggtgttg
ttcattgacttccccccggtacttcaacttcagttaaaacgatttgaatatgattttatg
cgggacacgatggtgaagataaatgatcgttatgagttcccattggaacttgaccttgat
cgggagaatggcaaatatttatcacccgatgctgatagaagtgttcgtaatctttacacg
cttcacagtgttttggtacacagtggcggggtgcacggaggacattattatgcatttatc
aggccgactctttctgatcagtggtacaaatttgatgatgaaagggtaacaaaagaagat
gtgaagagagcattggaggagcagtatggtggtgaagaagagttaccacagacaaatcct
ggattcaataacactccttttaaatttaccaaatattcaaatgcatacatgctggtgtat
atacgtgacagtgacaaggacaagataatctgtaatgtggatgagaaggacattgcagaa
catcttcgggagaggttgaagaaagaacaagaagaaaaagagcataaaaagaaagaaaag
gctgaggcacacctttatactattataaaggttgcacgggatgaagatctggtagagcag
attggtagggatatatattttgatctcgtggatcatgacaaagtccggagctttcgtatt
caaaagcagatgccgtttaaccttttcaaggaggaggttgctaaggattttggaatacca
gttcaatttcagcgtttttggttgtgggcaaagcgtcaaaaccatacatatcgcccgaac
cggccattaacgcctatagaggaaactcaatctgttggacacctgcgggaggtgtcaaat
aaggttcacaatgcagaacttaagttgttcttggaagtagagcatggcctggatttacgc
cctattgctccacctgataagacaaaggatgatattttgcttttcttcaagctatatgat
cctgagaaagaagaactccgttatgttgggaggctttttgtgaagagtactggtaagcca
ttagaaatcttaacaaaattaaatgaaatggctggctatactcccgacgaagagattgaa
ctttatgaggaaattaagtttgatcctcatgtcatgtgtgaatccgttgacaagaagtgc
acgtttcgaggcagccagcttgaagatggagacatcatttgctttcaaaaatcttctcca
gttgaaggtggtgagcagttacgctatccagatgttccctcatttatggattatgttcac
aatcgccaagttgttcattttcgagctctggataaacccaaggaggatgatttctgtcta
gagctgtcaaaacttcatacttatgacgacgttgtagaaagagtagcgcagcaacttggt
ttggatgatccatccaaaatcaggcttacccctcataactgttactctcaacaacccaaa
cctcaccctatcaagtaccggggggtagagcatttgtctgatatgctagtccactacaat
cagacttcggatacattgtactatgaagtattggacatccctctaccagaattacaaggt
ttgaaaactctgaaagtagcatttcatcatgctactaaagaagaagttgtggttcatact
ataagactgccaaaacagagcacagttggagatgtaattaatgatcttaaaacaaaggtc
gagttgtctcatcctaatgcagaacttcggctgcttgaagttttctatcacaagatctac
aaggtttttcctcctagcgaaaagattgagaacataaatgatcaatactggacattacgg
gcagaagagatcccagaagaagagaaaaatcttggtcctcatgatcgcctaatacatgtg
taccatttcacaaaagatacagctcagaaccaaatgcaaattcagaactttggggaaccg
tttttcttggtcatacatgagggtgagactttggctgaaattaaagagcgaatacagaag
aaattacagattccagatgaggaatttgccaagtggaagtttgcatttctttctctaggt
cgtccagagtaccttcaggactctgacattgtgtccaatcgttttcagagaagagatgtt
tatggtgcttgggagcagtatcttggattggagcactctgacaatgctcctaaaagagct
tatacgtctagtcagaaccgtcacacatttgagaagcctgtaaaaatttacaactag
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integrated database retrieval system
