Quercus lobata (valley oak): 115987972
Help
Entry
115987972 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115987972
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115987972
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115987972
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115987972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-RING_16
SAM_Ste50p
MIP-T3_C
Motif
Other DBs
NCBI-GeneID:
115987972
NCBI-ProteinID:
XP_030967447
LinkDB
All DBs
Position
4:complement(55396157..55408577)
Genome browser
AA seq
584 aa
AA seq
DB search
MVGGTSIGKTICSICYEDLKPLVEDLQAISICGHVFHELCLQQWFEYCSSAKKCSCPVCK
QSCSASNVNRLYFQSVGDSNDLILSQNVEDEDPRELRGQVQRLEVKVKGLSSLLECQGKE
LKDVNDQLCSCKELAKQEAALKNEALKQRTSMQQMLHMKSEELEKSTLERLRLQEKNMSL
AKELAAFKLVSDLDLDEGEVLKLASFGNGANNKDTIDILRKSLVMRNRSYKELMAKCNLL
GRGEARFGKKLEKAKEKINRLKTRLQELETALEVKDNEVLRLLKASKKSSSKRVIQNAVN
CNSSSNPLPANNFPSEDQEKQLSGSKLTSDQTGSLTSNPLCSRKLEKFSFTNHMKSNKKG
TSTMVLDKGRDDYFLIDEDSSKFSTVPCGLSNPDSRCQIGEDVTEQTTTPLRSEEASDLN
KETKVHRLDNLVGHLGSKTGINNDVGKTHATLDKDVILVPDDVTEVEPMLNIRKESPSPL
PLSEPGDICFSGGFLGPDGTNRYLGKWCKRGLSKESNTGNLIAVGADGRGGRIKVLRSSS
QSSLDGKETSVGAKRFKSGAKTSYSQSSQGCLQIEHFFGRVVNN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtggcacgagcattggcaaaaccatttgctccatctgctacgaagatctcaaa
cctctcgttgaagatctccaagccatttccatctgcggccatgtcttccacgagctatgt
ttacaacagtggttcgagtattgttcgagcgcgaagaaatgcagttgccccgtgtgcaag
caaagctgttccgcgagcaatgtcaatcgtctctactttcagtcggttggggattccaac
gatctgatcctctctcagaatgtggaagacgaagatccccgagaattgcgtggtcaagtt
cagagattggaggttaaggtcaaggggctgagctcgcttttagagtgccagggaaaggag
ctcaaagatgtcaatgaccagctgtgttcttgcaaggagctggcaaaacaggaagcagca
ttaaagaatgaagccttgaaacaaagaacatccatgcaacagatgcttcatatgaaatct
gaggagcttgaaaaatcaactttggaacgcttaaggttgcaagaaaagaatatgtccttg
gccaaagagcttgcagcattcaagttggtatctgatctggatctcgatgagggggaggtt
ctaaagcttgcctcctttggtaatggcgccaacaataaagataccatagacattctacgg
aaatccttggtcatgcgtaataggagttacaaagaattgatggccaagtgcaacctcctt
ggaagaggagaggctcgttttggtaagaaacttgagaaggctaaagagaaaataaataga
ttaaagacaaggctacaagaattggagactgctcttgaagtaaaagataatgaagttcta
aggttgctaaaagcttcaaagaaaagtagttccaaaagggttattcagaatgctgtgaat
tgtaattctagttccaatcctttgcctgccaataattttccgtccgaagatcaagagaag
caactttctggatccaagcttacttcagatcagacaggaagcctgactagtaatccattg
tgttctaggaaactggaaaagttcagtttcactaaccatatgaaatctaataaaaaaggt
acaagcaccatggttcttgacaaagggagagatgattacttcttgatagatgaggattct
tcaaaattttctacagttccttgtggactatcaaatcctgattctagatgtcaaattggt
gaagatgtaactgagcagaccactactccattaaggtcagaggaagcttctgacttgaac
aaagaaactaaagttcatagactagataacttggtagggcatttgggttcaaaaacgggt
atcaataatgatgtgggaaagactcatgctactctggataaggatgtgatattggttcct
gatgatgtaacagaggttgaacccatgcttaacattcggaaggagtctccatccccacta
ccactttctgaaccaggggacatatgtttttctggtggatttcttggccctgatggaaca
aataggtatttgggtaaatggtgcaagagaggcctgagcaaggaatcaaacacaggtaat
ttgattgctgttggagctgatggtagaggtggtagaatcaaagttctgagatcctcgagc
caatcttcactggatggtaaggagacttcagtaggggcaaagaggttcaaatctggagcc
aaaacaagttattctcagtcgtcacaagggtgcttgcaaatagaacacttcttcggaagg
gtggtcaataattaa
DBGET
integrated database retrieval system
