Quercus lobata (valley oak): 115994846
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Entry
115994846 CDS
T07350
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115994846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115994846
03051 Proteasome [BR:
qlo03051
]
115994846
Membrane trafficking [BR:
qlo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115994846
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115994846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Dsc3_N
Rad60-SLD_2
Ubiquitin_2
XPC-binding
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
115994846
NCBI-ProteinID:
XP_030974993
LinkDB
All DBs
Position
6:complement(53751802..53758480)
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AA seq
554 aa
AA seq
DB search
MGGDGAVDDANESNGGDGVNINIRCSNGSKFSVQISLDSSVGSFKSILAEKSDTPTDQQR
LIYKGRILKDDQTLQSYGLEADHTVHLVRGFSPAAASNPAGGTNPGVPNTTQSNARSVGS
NEGEALGGAGFGASLFPGLGINGMGGGGNGGGIGGNGLFGAGLPDFEQVQQQLTRNPNIM
REIMNMPVVQNLMNNPDVMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPE
LMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNAGNDNANPFAALLG
TQGGDQARNPSTTPSTTSSETTTGSPAPNTNPLPNPWTATAAAGGAPTSTTRSNPTGDAR
SQTPAGLGGLGLPGLEGMFGAMQDTTLVNQMMQNPAMSQMMQSLLSNPQYMNQILGLNPQ
LRSMLDSNSQLREMMQNPEFLRQLTSPETMQQLLTFQQALMSQLGRQQSTQEQGQTAGGG
TGLEMLMNMFGGLGAGSLAVPNRSNAPPEELYATQLSQLQEMGFFDTQENIRALIATAGN
VHAAVERLLGNSGQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgatggagctgtggacgatgcgaacgaatccaacggcggagatggagtcaat
atcaacatccgttgctccaacggttctaagttttccgttcagattagcctcgattcctcc
gttggatccttcaaaagcattctcgctgagaaatccgatacgccgaccgatcaacaaagg
ctcatttacaagggtcggatcctcaaggacgatcaaactcttcaaagctacggtttggag
gcagatcacaccgtccacttagttcgtggcttttctccagctgcagcatccaatcctgct
ggtggaaccaatcctggagttccaaataccactcaaagtaatgccagaagtgttggttca
aatgaaggtgaagcgttaggaggagctggttttggagcttcactatttcctggacttggt
attaatggtatgggtggtggcggcaatggtggtggtattggtggcaacggtttgttcgga
gctgggcttccagattttgaacaagtgcaacagcagttgactcggaaccctaatataatg
agagaaataatgaatatgcctgttgttcagaacctaatgaataaccctgatgtaatgcgt
aacttgattatgaataatcctcaaatgcgtgaaatcattgatcgaaaccctgagctagca
cacatacttaatgatcccagcacacttcgtcagacacttgaagctgcaagaaacccagaa
ctcatgcgtgagatgatgcgcaatacagatagagcaatgagcaatattgagtcttctcct
gagggattcaatatgttgaggcgaatgtatgaaaatgttcaagagccattcctaaatgcc
acaacaatggctgggaatgctggaaatgataatgcgaacccatttgctgctcttttgggg
acccaaggtggggaccaagcaagaaatccgtcaactacaccctcaaccactagttctgag
acaactactggctctcctgctcccaatactaatccactaccaaatccttggactgctact
gctgcagctggaggtgccccaactagcaccacgaggtcaaatcctactggggatgctaga
tctcagacacccgctggcttaggtggacttggtcttccagggcttgaaggcatgtttggt
gccatgcaggataccactttagtcaatcagatgatgcaaaatccagctatgtcacagatg
atgcaaagcctcctttcaaaccctcaatatatgaaccagattcttggtctcaatccccag
ctacgcagcatgcttgattccaattctcaactaagggaaatgatgcaaaacccagaattt
cttcgtcagttaacttctcctgaaacaatgcagcaactcttgacttttcaacaagctctt
atgtctcagcttggtcggcaacagtcaacccaggaacagggtcagactgctggtggaggt
acaggattggagatgttgatgaacatgtttggtggactcggagctggcagcctggctgtt
cccaacagatctaacgcgccaccggaagaactctacgccacccagctgtcacagcttcaa
gaaatgggtttctttgacacacaagagaatatacgggcattgattgccactgccggaaat
gttcatgcagcagtagagcgactgttggggaactctggtcagtag
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