Quercus lobata (valley oak): 115995446
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Entry
115995446 CDS
T07350
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115995446
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115995446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
TEX13
CENP-K
UPF0242
FlgT_M
Motif
Other DBs
NCBI-GeneID:
115995446
NCBI-ProteinID:
XP_030975877
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Position
6:50585211..50590695
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AA seq
498 aa
AA seq
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MNSVFNEQILADKLSKVNSTQQCIETLSHWCIFHRSKAELVVSTWDKQFHCSQMVQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPAALKSVTGTGDDQGKNVVSRLVAIWEERRVFGS
RARSLKDIMLGEELPPPLEFSKKRSRSVRIVKRDSRSIRTKLSIGGTAEKIVSAFHLVLS
EHPNEDAEMSKCKSAVHRVRRMEKDFDFTCSNAKDPKRKTLSKELEEEENILKQCIEKLK
SVEASRVALVSQLKEALHEQESELENVRTQMQVAQAQAEEASNMRKRLDDEDYVSKPSTA
TTPIDANSKAGQTTKKSAAAIAAEVADRLAASSSSQLIMTSVLSTFAAEEAKNAGLAKVS
TPSNSDSTVKPEKSLPVSEPIAFLSTQPFTTPPNHSYQSVLVPQSTVQNQVPTSQAQYHI
IPNPSSQQYLQPSGGIMTPYGYNSIPPLPPGPPPPPPHMVSPMVPLTLQVTQQPPAPPSF
RPLQPPGMVFYANPHLSQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgttttcaatgagcagattcttgctgataaactctccaaggtcaacagcacc
cagcagtgcattgaaactttgtcacattggtgtatatttcaccggagcaaagcagaactg
gttgtttcgacatgggataaacagttccactgttcgcagatggttcagaaagttcccctg
ttgtatctagcaaatgacatcctacaaaatagtaaacgaaaaggaaatgagtttgttact
gagttttggaaggttcttcctgctgcactcaaaagcgttactggaacaggagatgatcaa
ggaaaaaatgtggtctctagattggttgctatatgggaagaaaggagagtttttggatcc
cgtgcacggagcctcaaagatataatgcttggagaggaattgcctccacccttggagttc
agcaaaaaacgttcgcgttcagtcagaattgtaaaaagggattcacgctctattagaacg
aaattgtccattggaggtacagctgaaaaaatagtttcagcatttcacttggtgctcagt
gaacatcctaatgaagatgcggaaatgagtaaatgcaagtctgcagttcaccgtgtgagg
aggatggagaaagattttgatttcacctgttctaacgcaaaggatccaaagcgaaaaact
ctgtcaaaagaacttgaggaggaggaaaatattttgaaacagtgtattgaaaaacttaaa
tcagttgaagcaagtagagtagcgcttgtatctcagttaaaagaagctctacatgaacag
gaatctgaactggagaatgtccgaactcagatgcaggtagctcaggcacaggcagaggaa
gccagcaacatgcggaagcggcttgatgatgaagattatgtatcaaaaccatccactgca
accactccaattgatgcaaactcaaaagcagggcaaacaactaagaagtcagctgcagcc
attgcagctgaggttgcagacaggcttgcagcttctagctcctctcaactgataatgact
tctgttctctctacatttgcagcggaagaggcaaagaatgctggattagcaaaagtgtcc
acgccttcaaattccgattcaacggtaaaacctgagaagtcgttgccagtttcagagcct
attgctttcttgtccacacagccgtttactacaccgccaaaccattcgtatcaatcagtt
ttggttccacaatcaacagtgcagaaccaagtcccaacctctcaagctcaatatcatata
attccaaacccatcttcccaacagtatttgcagccatcaggagggatcatgaccccgtat
ggttataatagtattccacccttaccaccaggaccgccacctcccccaccccatatggtc
agtccaatggtgcctttgactttgcaagtaactcagcaacccccagcgccccctagtttc
cggccacttcagcctcctgggatggtattctatgctaatcctcacctttctcagtga
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