Quillaja saponaria (soapbark tree): O6P43_005733
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Entry
O6P43_005733 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_005733
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_005733
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_005733
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
KAJ7975885
LinkDB
All DBs
Position
3
Genome browser
AA seq
780 aa
AA seq
DB search
MSSKAEFKRKEKQQKKAKSGGFESFGFSPNVFKGIKRKGYRVPTPIQRKTMPLILSGMDV
VAMARTGSGKTAAFLLPMLQRLHQHVPHGGVRALILSPTRDLALQTIKFTKELGRFTDLR
ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFDM
GFAEQLHKILAQLSENRQTLLFSATLPSALAEFAKAGLREPQPVRLDLETKISPDLKLAF
FTLRHEEKHAALLYLIREKISSDQQTLVFVSTKHHVEFLNVLFREEGFEPSVCYGDMDQD
ARKMHISRFRARKTMLLIVTDVAARGIDIPLLDNVVNWDFPFTPKVFVHRVGRAARAGRT
GTAYSFVTAEDMPYLLDLHLYLSKPIRAAPTEEEVLQDMDGVMSKIDQAVANGETIYGRF
PQTVIDLVSDRVREIVDSSAELDLLRKTCANGFRLYSKTKPLPSKESIRRAKDFPCEGLH
PMFKNVVEGGELMALAFSERLKKFRPKQTILEAEGEAAKSKHLRGPSSQWVDVMKRKREV
HENVINLVHQQRSMKNVEEEESQFEITSSMEKEKKASGTKRKPQSFKDEDFYISSVPTNH
HMEAGLSVRANGVVGSNRLEAAVLDLVADDGGGMKKQKSVYHWDKRGKKYIKLNNGDRVT
ASGKIKTESGAKVKANKTGIYKKWKARSHSKISLKGESSDGTAQETTSAGRRQPQWSNRK
LQGGKKQHSVPNAHVRSEIKDLDQVRKERQKKADRISHMKNKNSKGKKFGKNGKRGKGRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaggcagagtttaaacgaaaagagaaacagcagaagaaggctaagtctggt
ggcttcgagtccttcggtttcagtcccaatgttttcaagggtatcaaacgcaaaggttac
agggtacccactccaattcagaggaaaactatgccactcatactttctggtatggatgtt
gttgctatggctcgcactgggtcaggaaagaccgctgcttttctgctgccaatgctccag
cgtttacaccagcatgtgccgcacggtggggttagagctctcattttgtctcccactaga
gacttggcgcttcagactatcaagttcaccaaagagcttggtcgattcacagatcttcga
attagtttattagtaggtggtgatagtatggaaagtcaatttgaagaattagcccagaat
ccagacattataattgcaactcctggtaggcttatgcatcatttgtctgaagttgatgac
atgtcattgcgtacggtggagtatgttgtttttgatgaagcagattgcctatttgacatg
ggttttgctgagcagttgcataaaattcttgcacagctgagtgagaaccgccaaacttta
cttttcagtgcaacattgccaagtgcccttgcagagtttgccaaggctggtttacgagaa
cctcagcctgttcgtcttgatttggaaactaaaattagccctgacttgaagcttgcattc
ttcaccttgcgacatgaagagaaacatgctgcattgctgtatttgattagagagaaaatt
agttctgatcagcagacattagtatttgtatccacaaaacatcatgtagagttcctcaat
gtattgtttagggaagagggttttgagccttcagtatgttatggtgatatggaccaagat
gctcgcaagatgcatatctcacgattcagggcaagaaagaccatgctgttaattgtcaca
gatgttgcagctcggggcatcgacattccattacttgataatgttgtcaactgggacttt
ccttttactcctaaagtctttgttcatcgagtcggacgagctgcaagggcaggtcgaact
ggtacagcatattcttttgtgacagcggaggatatgccttaccttttagatctccatcta
tatctctcaaaaccaatcagggctgcccctactgaagaagaggttttgcaggatatggat
ggcgtgatgtccaaaattgatcaggcagttgcaaatggtgaaaccatttatggtcgtttt
ccccagacagtaattgatcttgtttcagatagagttagggagattgtagattcttctgca
gaattggatttgttgcggaaaacctgcgcaaatggatttcgcttatattcaaaaacaaaa
cccctaccttcaaaggagtccatcagaagagcaaaggattttccctgtgaagggctgcat
ccaatgttcaagaatgtagtggaagggggtgagttaatggcacttgcattttcggagcgc
ttgaagaagtttagacccaagcagaccattctggaagctgaaggtgaagcagctaagtca
aagcatctccggggaccttctagtcagtgggttgatgtgatgaagagaaaaagagaggtc
catgagaacgtgataaatttggtgcatcagcaacgctccatgaagaatgtggaagaggag
gagagtcaatttgaaataacttcttcaatggaaaaggagaaaaaagcttctggcactaaa
agaaagccacagagtttcaaggatgaggatttctatataagttctgtaccaacaaatcat
cacatggaagcgggactctcagtaagagctaacggagtagtgggttcaaataggttggaa
gcagctgttcttgatctagttgcagatgatggtggtggcatgaagaaacagaaatctgta
taccattgggacaagaggggtaaaaagtacatcaagttaaataacggtgaccgtgttaca
gctagtgggaagataaaaacagagagcggtgcaaaagtaaaggcaaacaagacggggata
tacaagaaatggaaagcacggtcgcacagtaagatatctcttaaaggtgaaagtagtgat
gggactgctcaggaaaccacgtcggcagggcgtcgtcaacctcaatggagtaatagaaaa
cttcagggtggcaagaagcagcattcggtgcctaatgctcatgtccgttcggagatcaaa
gatttagatcaagtccggaaggaaagacagaagaaggctgacagaatttctcatatgaag
aacaaaaattcaaagggtaaaaagtttggcaaaaacggaaaaagagggaaggggaggaag
tag
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