Quillaja saponaria (soapbark tree): O6P43_006582
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Entry
O6P43_006582 CDS
T09778
Name
(GenBank) Polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03015
mRNA surveillance pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
O6P43_006582
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_006582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_006582
03041 Spliceosome [BR:
qsa03041
]
O6P43_006582
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
O6P43_006582
mRNA cycle factors
Stress granule specific factors
O6P43_006582
Spliceosome [BR:
qsa03041
]
Complex C
Other components
Complex C specific factors
O6P43_006582
BRITE hierarchy
Motif
Pfam:
RRM_1
PABP
RRM_occluded
RRM_3
SET_assoc
Motif
Other DBs
NCBI-ProteinID:
KAJ7976863
LinkDB
All DBs
Position
3
Genome browser
AA seq
663 aa
AA seq
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MLKFIRTDINLQKIPNNDRLAFGVFFDQWRLLLLFPPLRRSLYVGDLLPDVTEGQLFDAF
SEFKSLASVRVCRDSSTSRSLCYGYVNFISAQDAIRAIEAKNHSELNGKVIRVMWSHRDP
DARKSGVGNLFVKNLAESIDNMRFQELFQEFGNILSCKVAMSEDGKSKGYGFVQFESEES
ANAAIEKLNGSTVEDKEIYVGKFVRKGDRVLPSPDAKYTNLYVKNLDPDVTEELLQEKFS
VFGKIASLVVAKDENGLSRGFGFVNFDNPEEAKRALEKMNGTELGSKTLFVARAQKKAER
EQILRHQFEEKRKEQIMNYEGSNVYIKNIDDDVTDEELRAHFSPCGTITSLKLMRDEKGI
TRGFGFVSFSTPEEANKAVSTLHGNMFHRKRLYVSIAQRKEDRQARLQLQCAQHFTLAGR
STAVIPGGYPPYYYTAPGVVSQMPPPPGLMYQSLSLRPGWRANGFAPPAWPSFQPSPVPI
VASTPRLRRQNRGRMNGHTISQTNAHSVLSTLHVQQPAQSVSSTKESSNQQRTGQVKYVP
NGHQREMDKSSRVSSTASNSAGGTQGSKMLHSKLAAATPEKQKQILGEHLYPLVQKHKPA
LAAKITGMLLEMDNGELLLLLESPESLSAKVEEAVHVLKNSMTKVPGQDALHPNYLSAEV
AVN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaattcatcaggacagatatcaacctccaaaaaataccaaacaacgacagacta
gcatttggagttttctttgatcaatggcggcttcttctactgtttccgccgctccggcga
tctctttacgtcggtgacctcctcccggatgtcactgaaggtcagctatttgacgcattc
tctgagttcaagagccttgcgtccgtaagagtctgcagggactcctcaacgagcaggtca
ctgtgttatggatatgtcaacttcatctctgctcaagacgcgattcgtgcaattgaggcg
aagaatcactctgaattgaatggaaaagtgataagagtcatgtggtcacatcgtgatcca
gatgcaagaaaaagtggggtagggaatttatttgttaagaacctggccgaatcaattgat
aacatgagatttcaagaattgtttcaagaattcggaaatattttgtcctgcaaagttgcc
atgtctgaggatgggaagagcaaaggctacggctttgttcaatttgagtctgaggaatct
gcaaatgctgccatagagaagctgaatggctctacagttgaagataaggagatatatgtt
gggaagtttgtcagaaaaggagaccgtgtgttgcccagcccagatgctaaatatacaaat
ttgtatgtgaagaatttggacccagatgtaacagaagaacttctgcaggaaaagttctct
gtctttggaaaaattgctagcttggttgttgcaaaggatgagaacggcctatctagaggt
ttcggctttgtgaactttgataacccagaagaggctaaacgtgcattagaaaagatgaat
ggaacagagcttggctcaaagactctttttgtagccagggcacaaaagaaggcagagcgt
gagcaaatcttgcggcatcaatttgaggagaaacgcaaggaacagataatgaattatgag
ggatcaaatgtatatataaagaacattgatgacgatgttactgatgaagagctgcgggcg
cattttagtccatgtggcacaattacttctttaaaacttatgcgagatgagaaaggcatt
accagggggtttggatttgtcagcttttccacccccgaggaggccaataaagctgtaagc
accttacatggaaatatgtttcaccgcaaaaggctatacgtttctattgctcagagaaaa
gaggatagacaagcacggctgcagcttcagtgtgcccagcatttcacgctagctggacgg
tcaactgctgttatccctggtggatatcctccttactactacactgctcctggtgttgtt
tcacaaatgcctcccccaccagggctgatgtaccaatctctgtcactgaggccaggatgg
agggcaaatggctttgcacctcctgcctggccatccttccaaccatcaccagttcccatt
gttgccagtactccaagactacgtagacaaaataggggtaggatgaatgggcatacaatt
tcacagacaaatgctcactctgttttatctacactacatgtgcagcaacctgctcaatca
gtgtcctctacaaaagaatcaagcaatcaacagcggactggtcaggttaagtatgtcccc
aatgggcatcaacgcgagatggacaaaagtagcagagtctcatctactgcttccaactct
gctggagggacacagggatcaaaaatgctacatagcaagcttgcagctgctactcctgag
aagcagaagcagatacttggcgagcatctctacccacttgtccagaaacacaagcccgcc
cttgcggcaaagataacggggatgcttttggagatggacaatggagaattgctacttcta
ttggaatcaccagagtctctttcagccaaggtggaagaagctgtgcatgtgctgaagaat
tccatgaccaaagtacctggtcaagatgcacttcatcctaattacctatctgctgaggtc
gcagtaaactaa
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