Quillaja saponaria (soapbark tree): O6P43_006702
Help
Entry
O6P43_006702 CDS
T09778
Name
(GenBank) putative Dead box ATP-dependent RNA helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_006702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_006702
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_006702
Spliceosome [BR:
qsa03041
]
Complex A
U2 snRNP components
U2 related factors
O6P43_006702
Complex B
O6P43_006702
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
KAJ7977004
UniProt:
A0AAD7VIN4
LinkDB
All DBs
Position
3
Genome browser
AA seq
991 aa
AA seq
DB search
MKHKSRKEESERTEDDSKKSYRTRDRDRERDKDRKGERHRDREKRDRDIRRSEKERSSDS
EDKHDKEKEKRRDGDKDRNRSLDDERERARERKRERDKEDRERERERERDKERRERAKEK
ERERDREKEKREQREREDRERERMREREREREREKERRIRERERRREVDSDYSDDKDSRD
RESPRTNSADDDSDNKEKKPTREEEMEDEHRRLDEEMEKRRRRVQEWQELRRKKEEAERE
KHGDMLAMESLSPDLQNGVDYATGDEEIDPLDAFMNSMVLPEVKKLNSDTAPSTTHDKST
DVKTKRVNGSNGDKLRKGSTKSIGRIIPGEDSDSDYADLENDGDSLEDEDDDEKNFYIEV
KEISKMNAEEVAAYRKQLELKIHGKDVPKPVKSWNQTGLTSKILETIKKLNYEKPMSIQA
QALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLVAGDGPIGLIMAPTRELVQQ
IHSDIKKFTKVLGLQCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNL
RRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLTKPVE
IQVGGRSVVNKDIAQLVEEKCDALFKDLLRHGYACLSLHGAKDQTDRESTISDFKNNVCN
LLIATSIAARGLDVKELELVINFDAPNHYEDYVHRVGRTGRAGRKGCAITFVSEEDTRYA
PDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAK
KAQAKEYGFEEDKSDSEDEDSGIRKANGDISQHTTIAQLAAIAAASKVAPVSLPTSISTA
QMNPSGGAASVVGGTGLPIAPNDGAALAALQAAINLQHNLAKIQADAMPEHYEAELEIND
FPQNARWKVTHKETLVPISEWTGAAITTRGQHFPPGKVPGPGDRKLYLFIEGPTEQSVKR
AKAELKRVLEDITNQALQLPGGAQPGKYSVI
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaatctaggaaggaagaatctgagaggacggaagatgattccaagaagagt
tatcgcactagagatcgtgacagagaaagagataaggatagaaaaggagagagacataga
gatagggagaagagagaccgtgatatccggcgttctgagaaagagaggagcagtgattcc
gaggataagcatgataaggagaaagagaagcggagggatggggataaagataggaataga
agtctggacgatgaaagagaaagggcccgagagaggaaaagggaaagagacaaggaagat
agagagagggagagggaaagagagagagataaggagaggagagagagggccaaggagaaa
gaaagagagagggacagagaaaaagaaaagagggaacaacgcgagagggaagatagagag
agggagaggatgagagagagggaaagggaaagagaaagagaaaaggagaggagaatacga
gagagggaaagacgcagagaagtcgacagtgattatagtgatgacaaagactccagggat
cgggagagcccaaggacaaatagtgcagatgatgattcagataacaaagagaagaaaccg
acccgtgaagaggagatggaggatgaacataggaggttggacgaagaaatggaaaaacgg
aggaggagggttcaggagtggcaagagttgaggaggaaaaaggaagaagctgagagagaa
aaacatggtgatatgctagcaatggaatcgttgtcacctgatttacagaatggagttgat
tatgctactggtgatgaggaaattgatcctttggatgctttcatgaattctatggtgttg
cctgaagttaaaaagcttaacagtgatacagccccttcaaccactcatgataagagtaca
gacgtgaagaccaaaagggttaatggaagtaatggtgataaattaaggaaaggttcaact
aaatctattgggagaattattcctggtgaagattctgactcagattatgcagatcttgag
aatgatggggattctttagaagatgaagatgatgacgagaaaaatttttatattgaggtg
aaggagatctcaaagatgaatgctgaggaggttgcagcgtaccgaaaacaattggagttg
aagattcatggaaaagatgtgcctaagcctgtgaagtcgtggaatcaaactggactcaca
agtaaaatcttggagactataaagaagctaaactatgaaaagccaatgtctattcaagct
caggcactacctgtaattatgagtggccgggactgcataggcattgcaaaaactggctcg
ggaaaaacactcgcttttgtgctcccaatgttaaggcacatcaaggaccagccacctttg
gtagctggggatgggcctatcgggcttataatggcccctacaagggagcttgtccaacag
attcacagtgatataaagaagtttacgaaggtactgggtctccagtgtgttcctgtctat
ggaggttctggtgttgctcaacagataagtgaattgaaacggggtactgagatagttgtt
tgtactcctggtagaatgatcgacatactctgcaccagtggtggaaagattactaatttg
cgtagagtcacttatttggttatggatgaagcagatcgaatgttcgacatgggctttgaa
ccacaaatcactcgaattgttcaaaacattcggccagaccgtcaaactgttctcttttct
gccacgttccctcgtcaagttgaaactctggcccgtaaggtgttgactaaacctgtggaa
atacaggttggtgggaggagcgttgtgaacaaggacatagctcagttggttgaggagaaa
tgtgatgctttattcaaggatctcctaaggcatggttacgcatgcctctcgcttcatggg
gctaaggatcagacagaccgtgaatccaccatttctgatttcaaaaacaatgtctgcaat
ttgttgattgcaacaagtattgctgccagggggctagatgtgaaggagctggaactggtc
ataaattttgatgctccaaaccactatgaagattatgtacatcgtgttggtcgcacaggc
cgtgctgggaggaagggttgtgctatcacatttgtttctgaggaagacaccagatatgca
ccagatcttgtaaaagctttagaactctccgaacaagttgttcctgatgacctgaaagct
cttgctgatggtttcatggcaaaagtgaatcagggacttgagcaagcccatgggactggt
tatggaggaagtggatttaaatttaatgaagaggaagatgaagtgcgaagagcagcaaag
aaagcacaagcaaaagaatatggttttgaggaagacaagtctgattcagaagatgaagat
tctggtatccggaaggcaaatggtgacatctcacagcatactactattgctcagctagct
gctattgcagctgcctccaaagttgccccagtttcattgccaacttctatctctactgcc
cagatgaatcccagtggtggggcagcatctgttgtgggtgggactgggctgcccattgct
cccaatgatggggcagctctggcagcactacaagctgccataaacttgcagcataacttg
gctaaaattcaagctgatgcaatgcctgaacattatgaagcggagttggagataaatgat
ttcccccagaatgctcggtggaaagtcacacacaaggaaactttggtcccaatttcagaa
tggactggagctgccataaccactagggggcagcatttcccaccaggcaaggtccctgga
ccaggagatcgcaagctttacttgttcattgagggccctacagaacaatctgtcaagaga
gctaaagcagagttgaaacgtgttttggaagacatcacgaatcaggctttacaacttcct
ggtggagcacagccaggcaaatactcagttatataa
DBGET
integrated database retrieval system
