Qipengyuania spongiae: L1F33_02720
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Entry
L1F33_02720 CDS
T08950
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L1F33_02720 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_02720 (xseA)
Enzymes [BR:
qsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
L1F33_02720 (xseA)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
L1F33_02720 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
UVI39891
LinkDB
All DBs
Position
complement(552726..554189)
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AA seq
487 aa
AA seq
DB search
MATPEDTEGGLVARMREGDNAEALSVSAISQALKRTVEDRFGFVRVRGELSGVKRAASGH
LYTCLKDDKAVIDGVMWRSATPRLPFVPEDGLEVVASGKLTTYPGRSKYQIVIERMELAG
EGALLALLEKTKARLEAEGLFASERKRSLPFLPRTIGVVTSPTGAVIRDILHRLADRFPT
RVIVWPVLVQGQGAAEQVAGAVRGFSSMPEGHSDRPDLVIVARGGGSIEDLWIFNEEAVV
RAIADCTIPTISAVGHETDTTLADYAADRRAPTPTAAAEMAVPVRAELAATIADLVHRQR
QCALRPVTLGRERLEARVQRLPRAEALLQPQAQRLDDLAERLRRGLTDKAVRGRANLAEL
RLAPSLLQRNWREAARALARQRFDPGLVARPLVERRERLAALARVMTSLDPDNVLRRGYV
RVENGKGTTLTERATAEKEAALRLIFRDGALDVAPTVSGVPVASRPFPPRKPARPKESAP
GQDDLFA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccgaagacactgaaggcggcttggtagcgcgcatgcgggagggggacaac
gccgaggccctgtcggtaagcgcgatttcccaagcgctgaagcgcacggtggaagatcgc
ttcggcttcgtccgcgtgcgcggcgagctgtcgggcgtgaagcgcgcggcgagcggccat
ctctacacgtgcctcaaggacgacaaggcggtgatcgacggagttatgtggcgctcagcg
acgccgcgcctgcccttcgtgccggaagacgggctggaagtggtcgcgagcggcaagctg
accacttatcccggccgctcgaaataccagatcgtgatcgagcggatggagctggcgggc
gagggcgcgctgctggcgctgctggaaaagaccaaggcccggctggaggcggagggactg
ttcgcgtcggaacgcaagcggtccttgcccttccttccgcgcacgatcggcgtagtcacc
agcccgaccggggcggtgattcgcgacatcctccaccggctggcggaccgttttccgacg
cgggtgatcgtctggcccgtactggtccaggggcagggcgcggccgagcaggtggccggc
gccgttcgcgggttctcttccatgccagaaggccattccgaccggcccgatctcgtgatc
gtggcgcggggcggcggctcgatcgaggatttgtggatcttcaacgaggaggcggtggtg
cgcgccatcgcggactgcaccatccccacgatcagcgcggtcgggcacgagaccgacacg
acgctcgcggattacgccgccgaccggcgcgcgccgacccccactgcggcggcggagatg
gcggttccggtgcgtgccgaactcgccgcgaccatcgccgatcttgtccaccgtcagcgc
cagtgcgcgctgcgcccggtgacgctggggcgcgagcgactggaagcccgggtccagcgc
ctgccgcgcgccgaggcgctgcttcagccgcaggcgcaacggctcgacgatctggccgag
cggctgcgtcgagggctgaccgacaaggccgtacgcgggcgggcaaatcttgccgaactg
cggcttgccccctcgctcctgcagcggaactggcgcgaggcggcgcgggcgctcgccagg
cagcgcttcgatcccggtctcgtcgcgcggccgctggtcgagcggcgcgagcggctggcg
gcgctcgcacgggtgatgacctcgctcgatcccgacaacgtgctgcggcgcggctatgtc
cgggtggagaacggcaagggcacgacgctgaccgagagggcgacggccgagaaggaagcg
gcgctgcggctgatatttcgtgacggggcgctcgatgtggcacccaccgtgtccggcgtc
cccgtcgcttcgcgcccattcccgccccgcaagcccgcgcgcccgaaggaaagcgcgccg
gggcaggacgacctcttcgcgtaa
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