Quercus suber (cork oak): 112017192
Help
Entry
112017192 CDS
T05868
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112017192
09122 Translation
03013 Nucleocytoplasmic transport
112017192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112017192
03041 Spliceosome [BR:
qsu03041
]
112017192
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112017192
Spliceosome [BR:
qsu03041
]
Complex C
Other components
EJC/TREX
112017192
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112017192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
CENP-X
CarD_C
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
112017192
NCBI-ProteinID:
XP_023905432
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSNALLSVCLSAIPPVDSRLECSLLSTTNMEVFKRAILQPGPPQAFALQTVQEVIKPQKQ
TKLAQDENQLLENILRTLLQELVSSAVQSEEQIMQYGQLIDDGETSQGHIPRLLDIVLYL
CEREHVEGGMIFQLLEDLTEMSTMRNCKDIFGYIESKQDILGKQELFARGKLVMLRTCNQ
LLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPDGISIDFN
FYKTFWSLQEHFCNPASLTLASAKWQKFTSSLMIVLNTFEAQPLSDEEGDANNLEEESAN
FSIKYLTSSKLMGLELKDPSFRRHVLVQCLIIFDYLKAPGKNEKDFPSESMKEEIKSCEE
RVKKLLEMTPPKGKDFLRKIDHVLEREKNWVWWKRDGCPPFEKQPLEKKTVQDGSKKRRQ
KWRLGNRELSQLWKWADQNPNALTDPQRVRTPHIMEYWKPLAEDMDASAGIEAEYHHKNS
RVYCWKGLRFSARQDLDGFSRFTDHGIEGVVPLELLPPDVRSKYQAKPNDKSKRAKKDES
KGAAAQAEENQIATPASEVDGEGIRADLEASAAQMDVDATATGNISQGGTPTPDEHQKQS
SDTDNGQEAGQLEADAEVEAGMIDGETDAEVDLDAVG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgctcttctttctgtctgcctctctgctattcctcccgtcgattccagattg
gagtgttcattgctttcaacaaccaacatggaagtgttcaagagagcgatactacagcct
gggccacctcaagcctttgcactacagacagttcaggaagttataaaacctcagaaacaa
acaaaactagcccaagatgagaatcaattattagaaaacattcttcggacgttgcttcag
gaattggtgtcatctgcagtacagtcagaggagcaaataatgcagtatgggcaattgatt
gatgatggtgaaactagccagggtcatattcctcgtcttcttgacattgtgctatatctt
tgtgagagagaacatgttgaaggtggcatgatatttcaactgttggaagacttgacagaa
atgtctacgatgagaaactgcaaggatatttttggttatatagagagtaaacaagatatt
ttagggaagcaagagctttttgcgcgtgggaaacttgtgatgttaagaacatgcaatcaa
cttcttcgtcgtctatcaaaggcaaatgatgtggtgttttgtggacgaattctcatgttt
ctggcacatttttttcctttgtctgaacgctcagctgtgaatattaaaggagtttttaac
acatcaaatgaaacaaagtatgagaaagaccctcctgatgggatttctattgattttaac
ttttataagaccttttggagtttacaggaacacttttgcaaccccgcttctctaactctt
gcttctgctaagtggcagaaatttacatccagtttaatgattgttttgaatacctttgaa
gctcaaccattaagtgatgaagagggggatgctaataatttggaggaagagtcagcaaat
ttcagcataaaatatcttactagcagtaaactaatgggtttagaattgaaggatccaagt
tttcgacgccacgttcttgtgcagtgccttataatatttgattatttgaaggccccagga
aagaacgagaaagattttccatctgaaagcatgaaagaagaaataaaatcatgtgaagag
cgtgtgaaaaagttgcttgaaatgactccacccaaagggaaagattttcttcgtaaaatt
gatcatgtcttagaacgtgagaaaaattgggtgtggtggaaacgtgatggttgcccacca
tttgaaaagcaaccattggagaagaaaacggtacaagatggatctaaaaagcgtagacaa
aagtggagactgggaaatagagaactctctcagttgtggaagtgggcagatcagaatccg
aatgctttgactgatcctcaacgtgtccgaactcctcacatcatggaatactggaaaccc
ttggctgaagatatggatgcatcagctggaatagaagctgaatatcaccacaaaaatagt
cgggtttattgttggaaaggtcttcgattttcggctcgacaggacttggatggattttct
agattcactgatcatggtattgaaggggttgtgcctctagaacttttgccgcctgatgtt
cgatccaaataccaagcaaaaccaaatgacaaatccaagcgtgctaagaaggacgaatcc
aagggtgctgcagcacaagctgaggaaaatcagattgctacacctgcaagtgaagttgat
ggtgaaggaatcagagctgatcttgaagcctcagcagcacaaatggacgttgatgcgaca
gctactggcaatatatcccaaggtggcactccaacgccagatgaacatcaaaagcaaagc
tctgacactgataatggtcaagaggcaggtcagttagaagctgacgctgaggttgaggct
ggaatgatagatggagagactgatgcagaagttgatttagatgctgttggctga
DBGET
integrated database retrieval system
