Quercus suber (cork oak): 112024958
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Entry
112024958 CDS
T05868
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112024958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qsu02000
]
112024958
04147 Exosome [BR:
qsu04147
]
112024958
04090 CD molecules [BR:
qsu04090
]
112024958
Enzymes [BR:
qsu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112024958
Transporters [BR:
qsu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112024958
Exosome [BR:
qsu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112024958
CD molecules [BR:
qsu04090
]
Proteins
112024958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
AAA_21
AAA_24
RsgA_GTPase
AAA_30
AAA_15
AAA_18
PRK
Motif
Other DBs
NCBI-GeneID:
112024958
NCBI-ProteinID:
XP_023913377
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MIYGKYLLYLSKKSYTEYSKANTIIEQALSSIKTVYSFTAERVIVGKYSAILDRTTSLGI
KQGISKGLAIGSTGLSFAIWAFLSWYGSHLVMYKGERGGRIYAAGISFILSGLSLGMALP
DVKYFTEASVAATRIFDRINRIPLIDCENTKGLVLDKIRGELEFEHVKFTYPSRPDSIVL
KDFSLKVEAGKTVALVGASGSGKSTAIALVQRFYDADDGFVRIDGVDIKSLQMKWIRGKM
GLVSQEHALFGTSIKENILFGKLDATMDEVIAAAMAANAHNFIRQLPAGYETKVGERGAL
LSGGQKQRIAIARAIIKNPLILLLDEATSALDSESEALFQNALDQASMGRTTLVIAHKLS
TVRNADLIAVVIGGCIIEIGSHNDLINRKNGHYAKLAKLQRQFSCDDQEQSSELRVSSVA
RSSAGRPSTARSSPAFFPKSPIITADSPAPGSHPRPTFFRLLSLNAPEWKQGLVGSLSAI
AFGAVQPVYALTIGGMIAAFFAPSHEEMRARIRTYSLIFCSLTLVSIIMNLLQHYNFAYM
GERLTKRVRLRMLVKMLSFETAWFDDEQNSSGALCSRLSNEASMVKSLVADRLSLLLQTA
SAVTIAMIMGLVVAWKLALVMIAVQPLTILCFYTRKVLLSTMSTNCVKAQNQSTQIAVEA
VYNHRIVTSFGSVEKVLQLFDQAQEAPRTEARKKAWLAGIGMGSAQCLTFMSWALDFWYG
GTLVEKGEISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGATAVASVFKILDRQSLIPG
SYNNDGGDNGGTKLEKISGRIEMKKVDFAYPSRPETLVLRQFCLEVKPGTSIGLVGKSGC
GKSTVIGLIQRFYDVESGSVKVDGVDIRQLDIQWYRRHTALVSQEPVIYSGSIRDNIVIG
KLDALENEVVEAARAANAHEFISSLKEGYETECGERGVQLSGGQKQRIAIARAIIRNPTI
LLLDEATSALDVQSEQVVQEALDRIMIGRSTIVIAHRLNTIKGLDSIAFVADGKVMEQGT
YAQLKSKRGAFFTLACLQT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgatttatggaaaatatcttctctatttgtcgaagaagtcctacacggagtacagtaaa
gcaaacaccattattgagcaggctctgagctccattaaaacagtttattcattcactgct
gagagggtaatagttgggaaatattcagcaatattggatagaaccacgagcctgggaatc
aagcaaggtatttcgaaaggtctagccattggaagcacaggtctctcttttgcaatatgg
gcttttctatcttggtatggaagtcatttggttatgtacaaaggtgaaaggggaggaagg
atctatgcggctggaatctccttcatattaagtggactatcccttggcatggcacttcct
gatgtcaagtacttcacggaagcttcggttgcagctacacgaatatttgataggatcaac
cggatacccttaattgattgtgaaaatacaaaaggacttgtattggacaaaattagaggc
gaattagaatttgagcatgtcaaattcacatacccttctcgtccggattccattgtcctc
aaagattttagtcttaaagttgaagctgggaaaactgttgctcttgttggtgccagtgga
agtggcaaatccacagcaattgcattagtgcaacggttttatgatgctgatgatggattt
gtgagaattgatggtgtcgatataaaatctttacagatgaaatggataagagggaaaatg
ggacttgttagtcaagaacatgcattgtttgggacatcaataaaggaaaatatactattt
gggaagcttgatgccaccatggatgaagtcatcgctgcagccatggctgccaatgctcat
aacttcatcaggcagcttcctgcaggatatgagaccaaggttggtgaaagaggagcacta
ttatcaggtggacagaaacaacgaattgcgattgccagagccattataaaaaaccctttg
attctcctacttgatgaagcaacaagtgctcttgactccgaatcagaagcactattccaa
aatgcccttgatcaagcctccatgggaagaactaccttggtgattgcccacaagctttcc
acagttcgaaatgcagacctcattgcagtcgtaattggtggttgcataattgaaataggt
tcacataatgaccttatcaaccgaaaaaacggtcattatgccaaactggcaaaactacag
agacaattcagctgcgatgaccaagaacaaagctctgaattgcgtgtttcttcagttgca
agaagcagtgctggccggcctagcactgcgagatcaagcccagcattttttccaaaatca
ccaataataaccgcagatagcccagctccagggtctcatccccgtcctacctttttccgg
cttctctctctaaatgctccagaatggaaacaaggtcttgttggaagtctctcagctata
gcttttggggcggtccaacctgtctatgccttgaccataggaggcatgatagctgctttt
tttgccccaagtcatgaagaaatgcgtgctagaatccgcacatattcactaattttctgt
tcacttactttggtttcaatcataatgaacctcttgcagcactacaattttgcatatatg
ggagagaggctcacaaagagagtccggttgagaatgttggtgaagatgttgtcttttgaa
acagcttggtttgatgatgagcaaaactctagtggagccttatgttcaagattgagcaat
gaggcttccatggttaagtcccttgtagctgacagactttctttactactccaaacagct
tcggctgtgactattgcaatgatcatggggctagttgtggcttggaaactagcactagtc
atgatcgcggttcaacctctcacaattctatgtttctacacgcgtaaagtattactctct
accatgtccaccaattgtgttaaggcacaaaatcaaagtactcaaattgccgtggaagct
gtctataatcatagaattgtgacttcatttggaagtgtagagaaggttcttcaactattt
gatcaagctcaggaggcaccaaggacagaagcaaggaagaaggcatggctagccgggatt
ggcatgggttcagctcagtgcctaacatttatgtcatgggctttggatttctggtatgga
ggtacattagtggaaaagggagagatatcggccggggacgtgttcaagacatttttcata
ttggtcagcaccgggaaggtcatagctgaagctggtagcatgacttcagatttagccaag
ggtgccactgcagttgcatctgtgttcaaaattcttgaccggcaatcattgattccaggg
tcttataataatgatggtggtgacaatgggggaactaagttggaaaaaataagtggaagg
atagagatgaaaaaggttgattttgcatacccaagccgtcctgagaccttagtgttgcgc
caattttgcctggaggtgaaaccgggcacgagtattggacttgttgggaaaagtgggtgt
ggaaaatcaacggtgattggattaatccaaaggttttatgatgttgagagtgggtcagtg
aaagtagatggggtggacataaggcaattggatattcaatggtataggaggcacacggca
ctcgttagccaagagccagttatatattcaggtagcatccgtgacaacattgtgattggg
aagcttgatgccttagagaatgaggtggtggaggctgccagagctgccaatgcccatgag
tttatctcatcccttaaagaagggtatgaaactgaatgtggcgaaagaggagtgcaattg
tcaggagggcaaaagcaaagaatagcaatagcaagggccataattcggaatccaacaata
ttactactagacgaggcaacaagcgctctggatgtgcaatctgagcaagttgttcaagaa
gcattggatagaatcatgattgggaggagtacaattgtgatagcacataggctcaacacc
ataaaagggctcgattcaattgcatttgtggcagatgggaaggtgatggagcaaggaacc
tatgctcaactcaagagcaagcggggtgccttctttactcttgcttgccttcaaacttag
DBGET
integrated database retrieval system
