Quercus suber (cork oak): 112035676
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Entry
112035676 CDS
T05868
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
qsu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112035676
03083 Polycomb repressive complex
112035676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
112035676
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112035676
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112035676
HDAC complexes
Sin3A-HDAC complex
112035676
BRAF-HDAC complex
112035676
REST complex
112035676
SHIP complex
112035676
MiDAC complex
112035676
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112035676
Heterochromatin formation proteins
Other heterochromatin formation proteins
112035676
Chromatin remodeling factors
NuRD complex
112035676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112035676
NCBI-ProteinID:
XP_023924274
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MEESLGGVSLPSGPDAKKRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEINRPFPANPSDIRRFHSDDYVEFLASVTPETLSDHSFSRHLKRFNVGEDCPVFDGLFG
FCQSSAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGWGTGKNYALNVPL
NDGMDDESFRGLFRPLIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPS
NMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPPITEVPEEAEESMERRPKQRIWN
GDDYDSDPDEDLKPRHTSDMRDVVDEMEEDKRMDEDKIEEHPPS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcctgggaggcgtgtcgctcccatcgggacccgacgcgaagaagcggcgc
gtgagctacttctacgagccgagcatcggcgactactactacggccaaggccacccaatg
aaaccccaccggatccgcatggcccacaacttgatcgtccactactccctccaccgccgc
atggagatcaaccgcccctttccggccaacccctccgacatccgccgcttccactccgac
gactacgtcgaattcctcgcctccgtcacccccgagacgctctccgaccactccttctct
cgccatctcaagaggtttaacgtcggcgaggactgccccgtgttcgacggcttgttcgga
ttctgccagtcctccgccggcgggtccatcggcgccgccgtcaagctcaaccgcggcgac
gccgatatcgctctcaactgggccggtgggctccaccatgcgaagaagtctgaggcttct
gggttctgctacgtcaatgatatcgtgcttggcattcttgagctcctcaaagttcacagg
cgtgtactttatgtagatattgatgtccaccatggtgatggtgttgaagaggcattttac
accactgacagagtcatgaccgtgtcatttcataaatttggagatttctttccaggtacg
gggcacattaaggacacagggtgggggactgggaagaattatgccctgaatgtcccttta
aatgatggaatggacgacgagagtttccgtggtctgtttcgtcccctcattcaaaaagtc
atggaggtatatcagccagatgcagttgttcttcaatgcggagcagattcattggctggt
gaccggttggggtgcttcaacttgtccgtaaagggccatgcagactgccttcgttttctt
agatctttcaacgtacctctgatggtcttgggtgggggagggtatactatccgcaatgtt
gctcgttgctggtgctatgagacagcggttgcagttggggtagagcctgataataaattg
ccttacaatgaatattatgaatattttgggccagattatactcttcacgttgatccaagc
aacatggagaacctaaactcacccaaagatatggagaaaataaggaatacactgctagag
caactttccagattgccacatgcacctagtgtaccttttcagacaacgccacccatcaca
gaagttccagaagaggctgaagagagcatggaacgaaggccaaaacagcgaatatggaat
ggtgatgattatgactctgatcctgatgaagatttgaagcctcgacatacttctgacatg
agggatgtagttgatgaaatggaagaagataaaagaatggatgaagataaaatcgaagag
catccaccgtcttga
DBGET
integrated database retrieval system