KEGG   Quercus suber (cork oak): 112035676
Entry
112035676         CDS       T05868                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03082  ATP-dependent chromatin remodeling
qsu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112035676
   03083 Polycomb repressive complex
    112035676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qsu03036]
    112035676
Enzymes [BR:qsu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112035676
Chromosome and associated proteins [BR:qsu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     112035676
   HDAC complexes
    Sin3A-HDAC complex
     112035676
    BRAF-HDAC complex
     112035676
    REST complex
     112035676
    SHIP complex
     112035676
    MiDAC complex
     112035676
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112035676
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112035676
  Chromatin remodeling factors
   NuRD complex
    112035676
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112035676
NCBI-ProteinID: XP_023924274
LinkDB
Position
Unknown
AA seq 464 aa
MEESLGGVSLPSGPDAKKRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEINRPFPANPSDIRRFHSDDYVEFLASVTPETLSDHSFSRHLKRFNVGEDCPVFDGLFG
FCQSSAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGWGTGKNYALNVPL
NDGMDDESFRGLFRPLIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPS
NMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPPITEVPEEAEESMERRPKQRIWN
GDDYDSDPDEDLKPRHTSDMRDVVDEMEEDKRMDEDKIEEHPPS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggaagaaagcctgggaggcgtgtcgctcccatcgggacccgacgcgaagaagcggcgc
gtgagctacttctacgagccgagcatcggcgactactactacggccaaggccacccaatg
aaaccccaccggatccgcatggcccacaacttgatcgtccactactccctccaccgccgc
atggagatcaaccgcccctttccggccaacccctccgacatccgccgcttccactccgac
gactacgtcgaattcctcgcctccgtcacccccgagacgctctccgaccactccttctct
cgccatctcaagaggtttaacgtcggcgaggactgccccgtgttcgacggcttgttcgga
ttctgccagtcctccgccggcgggtccatcggcgccgccgtcaagctcaaccgcggcgac
gccgatatcgctctcaactgggccggtgggctccaccatgcgaagaagtctgaggcttct
gggttctgctacgtcaatgatatcgtgcttggcattcttgagctcctcaaagttcacagg
cgtgtactttatgtagatattgatgtccaccatggtgatggtgttgaagaggcattttac
accactgacagagtcatgaccgtgtcatttcataaatttggagatttctttccaggtacg
gggcacattaaggacacagggtgggggactgggaagaattatgccctgaatgtcccttta
aatgatggaatggacgacgagagtttccgtggtctgtttcgtcccctcattcaaaaagtc
atggaggtatatcagccagatgcagttgttcttcaatgcggagcagattcattggctggt
gaccggttggggtgcttcaacttgtccgtaaagggccatgcagactgccttcgttttctt
agatctttcaacgtacctctgatggtcttgggtgggggagggtatactatccgcaatgtt
gctcgttgctggtgctatgagacagcggttgcagttggggtagagcctgataataaattg
ccttacaatgaatattatgaatattttgggccagattatactcttcacgttgatccaagc
aacatggagaacctaaactcacccaaagatatggagaaaataaggaatacactgctagag
caactttccagattgccacatgcacctagtgtaccttttcagacaacgccacccatcaca
gaagttccagaagaggctgaagagagcatggaacgaaggccaaaacagcgaatatggaat
ggtgatgattatgactctgatcctgatgaagatttgaagcctcgacatacttctgacatg
agggatgtagttgatgaaatggaagaagataaaagaatggatgaagataaaatcgaagag
catccaccgtcttga

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