Quercus suber (cork oak): 112036661
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Entry
112036661 CDS
T05868
Name
(RefSeq) protein LHY-like
KO
K12133
MYB-related transcription factor LHY
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112036661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
112036661
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112036661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112036661
NCBI-ProteinID:
XP_023925259
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MDTYSSGEELVIKARKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGAPTSQVGTK
DGKLFTSVSSLDCKQALDLEKEPLPEKPNGDEKPENAKDNQDDNCSEVFTLHQEVHCSSV
SSANRSSVPTPVALRNSSTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQTI
QDTGTSNGSKLGNHNVPHEKPIQGDKTQDLNCALPMDEMQATQNYPRHVPVQVVDGSLGT
CAQTPSSDMSFQDSIFHPMGEVHGHHNPFTNPAASATTEHQNNVPRSSVNQSFPAFHPPF
TPIHHNQDNYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAATVWPYAKVEASADSPAST
QGVFPLRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLCAPLPTAFTCNPASTAAVPPTD
SGQAPAAKTEGEVNTLQNPPLQQLDPEYSEAVQAQHSASKLLIPSSSDSEESGGAKLNSG
PKATDHENAVAATELHDSNKTKGRKLVDRSSCGSNSTSSSDRETDALEKQEKGKEEPKEP
DANQSAADTSNRCCCSSSSRSVSYMNDSWKSVSEEGRLAFQALFSREVLPQSFSPPHDLK
NKGNQKDNTTDDKQNANENDGNASQLDLNSQTSGSCSGQPGILNFECNNNGEGLLSIGLG
YGKLKARRTGFKPYKRCSVEAKENRVANASSQGEEKGPKRIRLEGEASI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggacacatactcctctggggaagaactggttattaaggcaagaaaaccatatacaata
actaagcaacgggagagatggacggaggacgagcataataggtttctagaagccttgaag
ctttatggacgagcatggcagcggatagaagaacatataggaacaaagactgctgtgcag
atcagaagtcatgcacagaaattcttttcaaagttggagaaggaggctcttgttaaaggt
gttccaataggccaagctctagacatagatattccacctccacgccctaaaaggaaacca
agcaatccttatcctcgaaagacaagcattggcgctcccacatcacaggtgggaacgaag
gatggaaaacttttcacatcagtttcttctttggattgcaaacaagcactggacttggag
aaagaaccacttcctgagaaacctaatggagatgagaaaccagaaaatgcaaaagataat
caggatgacaattgctcagaagtctttacccttcaccaagaagttcattgttcttctgtt
tcttcagcaaacaggagttctgtaccgactcccgttgcactcagaaattcaagcacatta
agggagtttgtcccttcaatgaaaaggtcaataacccaagatgaaacaaatgaatcttat
gtcactattgaacttaaaggaaatcagaagttggagaaagctgatgccaaacagacaatt
caagatactggcacaagtaatggctcaaagttggggaatcataatgttccacatgagaag
ccaattcaaggtgacaagacacaggatttaaattgtgctttgccaatggatgagatgcaa
gccactcagaactacccaaggcatgtacctgtgcaagttgtagatggaagcttaggaaca
tgtgctcaaactccttcctcagatatgtcattccaggactccatatttcacccaatggga
gaggttcacggacaccataatccctttacaaatccagcagcatctgctaccactgaacat
caaaataatgttcccagatcttctgttaatcaatcatttccggctttccatcctcccttt
accccgattcaccataaccaggacaactaccaatcatttctccacatgtcctccacattt
tcaagccttattgtctctactttgatgcaaaatcctgcagcccatgctgcagcgagtttt
gcagctacagtttggccctatgcaaaagtggaggcttctgcagattctcctgcaagcacg
caaggggtttttccactgaggcaaatgggctctactccaagtatggcagctattgctgct
gctactgtagctgctgcaactgcatggtgggcagcccacggactggttcccttatgtgct
cctcttcctactgcttttacctgcaatcctgcatctacagctgcagttccaccaacagat
tctggccaagcccctgcagccaagacagagggagaagtgaatactcttcaaaatcctccc
ttgcaacaactcgacccagaatattcagaagctgttcaagctcagcattcagcctcaaaa
ttgctaattccgtcatcatcagactctgaggagagtggaggtgcaaagctaaactctggg
ccaaaagctactgatcatgagaatgctgtagcggctactgagctccatgattcaaacaaa
acaaaaggcagaaaactggttgaccgttcctcatgtggttccaactcaacttctagcagt
gacagagagacagatgcattagagaagcaggagaaagggaaggaagagccgaaagaacct
gatgcaaaccagtcagctgctgatactagtaatcggtgttgttgtagtagtagtagtaga
agtgtaagctacatgaatgattcctggaagtcagtctctgaagagggccggctggcattt
caagcactgttctctagagaggtactgcctcaaagtttttcacctccacatgatctgaag
aacaaggggaatcaaaaggacaataccacagacgataagcaaaacgcaaatgagaatgat
ggaaatgcatcacagttagacctcaacagtcaaacatctgggtcttgttctggccaacca
ggaatcttaaactttgaatgcaacaacaatggggaggggctgctgtcaatagggcttgga
tatggaaagcttaaggctcgtcgaacgggatttaagccatacaaaaggtgttcagtagag
gccaaggaaaatagggtggcaaatgctagtagccaaggtgaagagaaaggtccaaagagg
atacgcttggaaggggaggcttcaatttga
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