Quercus suber (cork oak): 112039671
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Entry
112039671 CDS
T05868
Name
(RefSeq) protein ROS1-like isoform X1
Organism
qsu
Quercus suber (cork oak)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
112039671
NCBI-ProteinID:
XP_023928322
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MDVKEGQDGLQIEGSWIPKTPVKPILPRTTTIYTDSQGNQLDQAIWLGSDTFSSNFTQAS
QASEIVACCNSSNCGQVHNCVNSSANKNIDSVGACCIEPLPRWNNLRFADLLALADAASA
AAGNVAPPPPQGNDSVATNSFLSVTNCQNGNYVADHSSASLFGNHDLQSKPWTNGHCMAE
EPNYELCTPHRQSYDLNLPPRTMSDANSSKTNPQLAPITPEKDMRVPKKSVSDVQHLCAN
ERMDEGETEKQNEGAATRVDTNEVQPNKELSTPVTDSSLAAVSTPFKENDFPDKGSSQVI
DLNKTPQQKPRRRKHRPKVITEGKSKRTRKPVTPKPAGSKENPTGKRKYVRRKGIEKPST
TPAEVIGEFTDLKTPKRARKSCRRALNFDVEGQAQDESSTCKSYIDLDPDLPTQDFCSNE
EESISTVQLSKGAVKHTEAGIAYDLACSMNQMLKDYISLPERQAPSTTHPTKTDSSQEEL
NADSHKDNNTEGEGQLIAHDGKENTAKVILKTDNQISPKSPNDSNCSTSAIFSKGEQARQ
SKRRHSHAAEQADASTTNLAGAQFNILDAYNMMNWMHFPNIHKKKRTEKGQNSTTSSSSS
CVTATKNVVRIAKCPLQDAEENPCSSKASHWVSGPQSDAGTVSLTDGGKDLQDNHPSFEC
ILALIQTERSTRKRSRGPTRARNSTSLTNFPECITHPTKQPLVEGDGQTIEIPQNPHTCI
EALVAEMHTTLARKKRTKKRNSVVGSASHQKLVLYNHNLPSFNLSGASHEVTWKQMFSID
AIVEQFKHLNINRESSNVSLLQHNAVVPYSMQNQEHNALVLYKRDGTVVPFEGWFDPIKK
RRPRPKVDLDEETNRVWKLLLENINSQGIDGTDEEKAKWWEEERRVFRGRADSFIARMHL
VQGDRRFSQWKGSVLDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLKSTSNQNACYEEGLS
FVVDEPELYILDPEDSIQWKPVCDQSSMTLHDPEHNEEKEVVNSNESPGGSTVAETACYT
GGGRLAKTYSVSSQNSSAVLTAENIGSGLERNSEADYLLNGSKPNSSDGLASIVELQQMA
GSTLLDEFYSHVSGNAPSDENPKDACNESKGMNHDNQRQDIDKINDPQSSLGASMSLSSN
YHLHLTSTSRVPEVECSEMFKEETQSSDISQNKDENSVSEQSALTVESSSQDTVQNKPTM
NVPKAPRSSSKSGNSVQVYENVIIPSQSQVLGDPKIVESLAQGQNIEVQQSLPSLSGETQ
DVAAISEMNAATIKAKRRRAAKEKKENVNWDNLRKQVEANGIKRERTANTMDSLDWEAVR
CADVNEIAKTIKERGMNNMLAERIKDFLNRLVREHGSTDLEWLRDVPPDQAKEYLLSIRG
LGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQK
YLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALP
GPEEKSIVTATENRPAENPTLNIDRLALPLPQECRQLEAKTGVSNCEPIIEEPATPEPEC
TQAKNDIEDTIYEDPDEIPIIKLNIEEFSQNLQNYMQNNMELQDGDVSKALVALTPEAAS
IPTPKLKNVSRLRTEHQVYELPDSHPLLNGLDKREPDDPCSYLLAIWTPGETANSIQPPE
KSCSSQEYGRLCDKKECFSCNSIREENSQMVRGTILIPCRTAMRGSFPLNGTYFQVNEVF
ADHDSSLNPIDVPRNWIWNLRRRTVYFGTSIPTIFKGLTTQEIQQCFWKGFVCVRGFDQK
SRAPRPLMARLHFPASKLTKTKGKTDD
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaagaaggccaagatgggttacaaattgagggttcttggattccaaagacc
cctgttaaacccattctgccaagaacaaccacgatctacacagactcacagggaaaccag
cttgaccaagcaatttggttgggatcagacacattttcttctaattttactcaagcctct
caagctagtgaaatagttgcatgttgcaattcctcaaattgcggccaagtacacaactgt
gtcaacagttcagctaataaaaatattgacagtgtgggagcttgctgcatagagccctta
cccagatggaataacctccggttcgccgatctcctggccctcgctgatgcggcctccgcg
gcggccggtaatgtggcaccaccaccaccgcagggtaatgacagtgttgcaacaaattct
ttcttgtctgtcacaaattgtcagaatggaaattatgtcgcagatcacagctctgcaagc
ctgtttggaaaccatgatctccaatcaaagccgtggacaaatggccactgcatggcggaa
gaacctaactatgaactttgtacccctcatcggcagtcctatgatcttaatttgccaccg
aggacaatgtctgatgcgaactctagcaagaccaatccccagttggcacccataacacca
gagaaggacatgagagtaccaaagaaatcagtttcagatgttcaacatttatgtgcaaac
gaaagaatggatgagggagaaacagagaagcagaatgaaggtgctgccacaagagttgac
accaatgaggtccaacccaataaagaactctcaacccctgttacagattcatcacttgct
gctgtttccactccattcaaggagaatgacttccctgacaagggaagtagccaagttatt
gacctgaataaaacaccgcagcagaaaccaaggcggagaaaacaccggcccaaggtgatc
acggaaggaaaatcaaaaagaactcgcaagccagtgactccaaaacctgctggttccaag
gaaaatccaacagggaagaggaagtatgtacgaaggaaaggaattgaaaagccctctacg
actcctgcagaagtaattggagaatttactgatctgaaaacgcccaaacgtgctagaaag
tcatgcaggagggctttaaattttgatgtagaagggcaagcgcaagatgaaagctctaca
tgcaaatcttatattgatttagatccagatttaccgacccaagatttttgcagtaacgag
gaggaatcgatatcaacagtacagctcagcaaaggggctgtaaaacacacagaagctggc
attgcctatgacctcgcctgctccatgaatcagatgctgaaagattacatatcattgcct
gaaaggcaagccccaagcacaacgcatcctacaaagactgattcctcacaggaagaattg
aatgctgattcccataaggataacaatacagaaggggaaggtcaactgattgctcatgat
ggaaaggaaaacactgcaaaagtcatcctaaaaactgacaatcaaatatcaccgaaaagt
ccaaatgattccaactgcagcaccagtgcaattttttcaaaaggagaacaggcaaggcaa
tcaaagagaaggcattctcatgctgctgaacaagctgatgccagcacaacaaacctagcc
ggagctcagtttaatattttagacgcatataatatgatgaattggatgcattttccaaat
attcacaagaaaaagagaactgaaaagggacagaattctaccacctctagttcatcatct
tgtgttactgccactaaaaatgttgtgagaatagcaaaatgtcccctacaagatgctgaa
gaaaatccttgttcatcaaaagccagccactgggtttctggtccccagtctgatgctggt
acagtttccctgacagatggaggaaaagatcttcaggataatcatccaagttttgagtgt
attctagctttaattcagacagagaggtcaacaagaaagagatctagaggccctactcgc
gctcgtaactcgacttccctgaccaattttccagagtgcataactcaccccaccaaacaa
cctctagtggaaggtgatgggcaaacaattgagattccacaaaatcctcacacatgcata
gaggccctggttgcagagatgcacacaacattggcaagaaagaagcgaaccaagaaaaga
aactctgttgtcggttcagcttcgcaccagaaattagtcttgtataatcacaacctaccc
tctttcaatttatcaggtgcttctcatgaagtaacatggaagcagatgttttctattgat
gcaatagtcgagcaatttaagcatctaaatatcaatagggaaagcagtaatgtttcacta
ctacagcataatgcagttgtcccctacagcatgcaaaatcaagagcacaatgcactcgtc
ctttataaaagagatggtacggttgtaccctttgaaggttggtttgatcctatcaagaaa
cgacgtccacggcctaaagttgaccttgatgaagagactaatagagtgtggaaacttttg
ttggagaatataaacagtcaaggtattgatggaactgatgaagagaaggcaaaatggtgg
gaagaagaacgaagagtattccgtggacgtgcagattcttttattgcacgcatgcatctt
gtacaaggagatagacgcttctcacaatggaaaggatcagtcttggactcagttgttgga
gtttttctcactcagaatgtctctgaccatctttctagttctgcatttatgtcacttgct
gcacacttcccccttaagtcaaccagcaaccaaaatgcatgctacgaagaagggttgagc
tttgtagtcgacgaaccagaactgtacattctggatccagaagacagcatacaatggaaa
ccagtgtgtgaccagagttccatgacgctacatgaccctgaacataatgaagaaaaagag
gtagttaacagcaatgaatcccctggaggcagtacagtggcagaaacagcatgttataca
ggaggaggtaggctagcaaaaacctattcagtttcatctcaaaactcttcagctgttcta
actgctgaaaacataggatcaggcctggagaggaactcagaagcagactatctattaaat
gggtctaagcccaacagctcggatggcttggcttctattgtggagcttcaacagatggct
ggatctacactgctagatgaattttacagtcatgtaagtggcaatgcaccttctgatgag
aacccaaaggatgcatgcaatgaatccaaaggtatgaatcatgacaaccaaagacaagat
atagacaagataaatgatcctcaaagctccctaggagcatccatgagcctttccagtaat
tatcatttgcatctgacctccacttcaagagtgccagaagttgagtgctctgagatgttc
aaagaagaaacccaatcttctgacatttcccagaacaaagatgaaaatagtgtgagtgaa
caaagtgcactaacagttgaatcttcaagtcaagatactgttcaaaataagcctacaatg
aatgttccaaaagctcctagatcttcaagcaaatcaggcaacagcgttcaagtatatgaa
aatgtgatcattccatctcaaagccaggtacttggggaccctaaaattgttgaatcacta
gctcaggggcaaaacattgaagtgcaacaaagcttgccaagtctttctggagaaacccaa
gatgttgcagctatcagtgagatgaatgctgctactataaaagcaaagagaagaagagct
gcaaaggagaaaaaagaaaatgttaactgggataatcttaggaaacaggtggaagccaat
ggaattaaaagagaaagaacagcaaacacaatggactcactggactgggaagctgtaaga
tgtgcagatgttaatgagatcgccaaaaccatcaaagaacgggggatgaacaacatgctt
gcagagcgtatcaaggatttccttaaccgactggttagagaacatgggagtactgattta
gaatggttgagagatgttccacccgaccaagcaaaagaatatctgctaagcataagggga
ttggggttgaaaagtgtagagtgcgtacggcttttgacactccaccatcttgctttccca
gtggacacaaatgttggacgaatagctgtaagattgggatgggtgccccttcagccactg
cctgagtcacttcagttgcatcttctagaactgtacccagtcttggaatccattcaaaaa
tatctctggccccgattatgcaagctcgaccaaagaacattgtatgaacttcattaccag
atgattacatttggaaaggtcttttgtacaaaaagcaagccaaattgcaatgcatgccca
atgagaggagagtgtcgacactttgctagtgcatttgcaagtgcaaggcttgccctgcct
gggccagaggagaaaagtatagtgactgcaactgaaaacagaccagctgaaaaccctact
ttgaacattgatcgactggccctgcctctccctcaggagtgcagacaattagaagcaaaa
actggagttagtaactgtgaacctattattgaagagccagcaacaccagagccagaatgc
actcaagcaaaaaatgacattgaggacactatatatgaggaccctgatgaaattcctata
atcaaacttaacattgaggagttctctcagaacttacagaattatatgcaaaataacatg
gaacttcaagatggtgacgtgtcaaaggccttggtcgctttaactccagaagctgcatca
attccaacacccaagcttaaaaatgtgtctcgactacgaacagagcaccaagtctatgaa
cttccagattcacaccctcttctgaatgggctagataaacgagaacctgatgatccctgc
tcataccttcttgctatatggacaccaggtgagacagcaaattccatccaaccacctgaa
aagagttgcagctcccaagaatatggcagattgtgtgacaagaaggaatgtttctcatgc
aacagcatacgtgaagaaaattcccagatggtccgaggaacaattttgataccatgtcga
acagcaatgaggggaagctttccactcaacggcacctactttcaagttaacgaggtattt
gccgaccacgattcaagtctcaacccaattgatgttcctagaaattggatatggaacctg
cgaaggcgaactgtgtactttggaacctccataccaacaatatttaaaggtttaacaaca
caagaaattcaacaatgcttttggaaaggttttgtttgtgtgaggggatttgaccagaaa
tcaagggcacctcgtcctctaatggcgagactgcacttcccggccagcaagttgaccaag
acaaagggtaagacggatgattag
DBGET
integrated database retrieval system