Rickettsia amblyommatis Ac37: AL573_01410
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Entry
AL573_01410 CDS
T04237
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rab
Rickettsia amblyommatis Ac37
Pathway
rab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL573_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rab03021
]
AL573_01410
03400 DNA repair and recombination proteins [BR:
rab03400
]
AL573_01410
Enzymes [BR:
rab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL573_01410
Transcription machinery [BR:
rab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL573_01410
DNA repair and recombination proteins [BR:
rab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL573_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ALA61453
LinkDB
All DBs
Position
263633..267754
Genome browser
AA seq
1373 aa
AA seq
DB search
MVSLRDNIEAQPLSHNSRIRKNFGHINLVADIPNLIEIQKNSYEKNFLQLNIKDSERKNK
GLQSILNSIFPISDSSNIANLEFVKYEFDAPKYDVEECSQRSLSYAAPLKVTLRLSIWDI
DEDTGTREIKGIKEQEVYMGDIPLMTKNGTFIINGTERVVVSQMHRSPGVFFYHDEGKVH
SSGKLLYSARVIPYRGSWLDLEFDAKDVIYFRIDRKRKLYTTTLLRAIGMSTEEIIKFYY
NSVTYKLVKNKGWAVKFIPQHITTHRLTSDLVDADTGNILLKAGQKITPRLAKKYFGEGL
NNILVAHETLIGKYLYEDLRDPASDEVLAKIGEMITADMLNVINDLKIKNVNVLVINPQS
GPYIRNTLFADKNQDREAALCDIFRVLRPGEPANIEAAESLFYNLFFDAERYDLSEVGRI
KMNSRLELNVSEEVTVLTIDDIKNIVRVLVELKDGKGIIDDIDHLGNRRVRSVGELIENQ
FRIGLVRMEKSLIERMSAGDVDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSE
ITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINK
HGFIESPYRRVKDGCVTDEVVYLSAIDEGKYKIGQANSKVNKDGKLQGEFINCRVEGGNF
VMVAPYEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPFVGT
GVEGVVAKDSGASVLALHDGIVEQVDSNRIVIRTLEQKVNGSPSVDIYNLLKFQKSNHNT
CINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIV
KEDVFTSIHIEEFEVIARDTRLGPEEITRDIPNVSEEALHHLDEVGIIYIGAEVKAGDIL
VGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRVFSRRGVEKDQ
RAIAIEKQQIEKLAKDRDDELEIIEHFVFSWLEKLLVGQVIINGPKQVTVGQTITTEILK
GLSKGQFWQITVEDANVMNEIEQIKTHYDEKKEALDKRFATKVEKLQSGDDLPQGALKVV
KVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIG
QILETHLGWASINLAKKISTLVKEYKNKHIGIEQIKKFLIELYGENINAILERPEEEIIS
FCKKVSKGVHFATPVFDGAKVQDIKDMLKLAGQDPSGQVKLIDGRTGEYFDRLVTVGQKY
LLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEML
TVKSDDVNGRIKTYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVTSS
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaagggataatatagaagcacaacccttgtcacataatagcagaataaga
aaaaatttcggtcacataaatttagtagcagatataccgaatttgattgaaattcaaaaa
aattcatatgagaaaaactttctacagttaaatattaaagattctgaaagaaaaaacaaa
ggtttacaatctatattaaactcaatttttcctatttcagattcctccaatattgctaat
ttagaatttgtaaaatatgaattcgatgctccaaaatatgatgtagaagagtgcagtcaa
agaagtttaagttatgctgctcctcttaaagttactttaagattaagtatttgggatata
gatgaggataccggtactagagaaattaaagggattaaagagcaagaagtatatatgggt
gatatcccattaatgactaaaaacggtacttttattatcaacggtacggaaagagtagtt
gtatcacaaatgcatcgctcacctggtgtattcttttatcatgatgaaggcaaagtccac
tcttccggcaagcttttatattccgctcgtgttattccatatagagggtcttggcttgat
ttagaattcgatgctaaggatgttatttatttcaggattgatagaaaaagaaagctttat
actactactttgcttagagctataggtatgagtactgaagaaattataaaattttattat
aattcagtaacttataagcttgttaaaaataaaggttgggcggttaaatttatacctcag
catattactactcatcgtttaacaagtgatttagtagatgcagataccggaaatattcta
ctgaaagcagggcaaaaaattactccgcgtttggctaaaaaatattttggggaagggctt
aataatattttagtagctcatgaaactttaatcggcaaatatctatacgaagatttaaga
gatcctgcaagcgatgaagtattagcaaaaatcggtgaaatgattactgctgatatgcta
aatgttattaatgatcttaaaattaaaaatgttaacgtattagtaatcaatcctcaatcc
ggtccatatataaggaacaccttatttgcggataaaaatcaggatcgtgaggcagcatta
tgtgatattttcagagttctaagaccaggcgaacctgctaatatagaagcggctgaaagc
ctgttttataatttattctttgatgcggaaagatatgatctttcagaagtcgggcgaata
aaaatgaattctaggttagagctgaatgtttctgaagaagttacggttttaacaattgat
gatattaaaaatatcgtaagagttttagtagagcttaaagacggtaaaggtatcatagac
gatattgatcatttaggtaatagaagggttagatcggtaggtgaattgatagaaaatcaa
tttagaataggtttagtccgaatggaaaaatctttaattgaaaggatgtcggcaggtgat
gttgataccgtaatgcctcatgatttagtaaattctaaaattttagtttcagtagtaaaa
gaattttttagtacctcccaattatcccaatttatggatcaaacaaatccattatcggaa
ataactcataaaagaaggctatcggcactcggtcccggaggtcttagtcgagatcgagca
ggttttgaggtgcgtgacgtacatccgactcattacggtcgtatttgtcctattgaaaca
cctgaaggtcagaatatcgggttaattaactctatggctacttatgctagaataaataaa
cacggttttatagagagtccgtatagaagagttaaagatggatgtgtaaccgatgaagtg
gtatatctttctgctattgacgaaggtaaatacaaaatcggacaagcaaattctaaagtt
aataaagacggaaaactgcaaggagagtttattaattgccgtgttgaaggcggtaatttt
gtaatggtagcaccgtatgaggtagacttcattgatgtaacccctatgcaggtagtatcg
gttgcggcttctcttatacctttcttagaaaacgatgatgctaaccgtgctttgatgggt
tcaaacatgcaaagacaagccgttcctttaattaaaacggatgcaccttttgtaggtacc
ggagttgaaggggtagtagctaaagattccggagcgtcagtgcttgcattacatgacggt
attgttgagcaggtagattcaaatagaatcgtgattagaactctagaacaaaaagttaac
ggttctccttcggttgatatttataacttactaaaattccaaaaatccaatcataatact
tgtataaatcaaaagcctttagttaaggttggtcattacgttaagaaaaacgatattata
gctgacggtcctagtacggataacggtgaaattgctttaggtagaaacgtgcttgtggct
ttcttaccttggaacggttataattttgaagattcaattttaatatccgaacgtatagta
aaagaggatgtgtttacatctattcatattgaagagtttgaagtaatagctagagataca
cgccttggtcctgaagaaattacccgtgatataccgaatgtaagtgaagaagcgttgcat
catcttgatgaggtcggaataatttatataggtgcagaagtaaaagctggtgatatttta
gtcggaaaagtaacaccgaaaagtgaatcgcctattactcctgaagagaagctactacgt
gctattttcggggaaaaagcttttgacgtaaaagattcatcgctgcacgtaccttccgga
gttagcggaactgtagtagaagtaagggtattttctcgtagaggtgtagaaaaagaccag
cgagctattgctattgaaaaacaacaaattgaaaaattagcaaaagacagagacgatgaa
ttagaaattattgagcattttgtgtttagttggcttgaaaagcttttagtagggcaggtg
attattaacggtcctaagcaagtaacagtaggacaaactattactactgaaatactaaaa
ggcttatctaaagggcaattttggcagattaccgtggaagatgcaaatgtaatgaatgaa
atagagcagataaagactcattatgatgagaaaaaagaggctcttgataaaagatttgct
actaaggtagagaaattgcaaagtggtgatgatttacctcagggagctttaaaagtagta
aaagtatttattgcaactaagcataaattacaacccggggataaaatggcaggaagacac
ggaaataaaggtgttatttcacgtatcgtacctgaagaggatatgccgtttttagaagat
ggaactgtggtagatatcgttcttaaccctctaggtcttccgtcccgtatgaatatagga
cagattttagaaacgcatcttgggtgggcatcaataaatttagcaaaaaaaatatctacc
ttagtaaaggaatataaaaataaacatataggtattgagcagattaagaaattcttaatt
gaactgtatggagaaaatattaatgctatacttgaaagaccggaagaagagattatctct
ttttgtaagaaagtaagtaaaggcgtacattttgcaactcctgtatttgacggagcaaaa
gttcaggacattaaagatatgctaaagcttgccggtcaagacccttcaggacaagtgaaa
ttaattgacggtagaaccggtgaatattttgaccgtctagtaaccgtcggacagaaatat
ttgctgaaattgcatcatttagtcgataataaaattcactcccgttctataggaccttat
agcttagtaacgcagcaaccgcttggaggtaagtctcatttcggcggacagcgtttcggg
gaaatggaatgctgggcattacaagcttacggtgcagcttatacgttacaggaaatgtta
acggttaagtcggatgacgtaaacggtaggatcaaaacttatgattctatagtacgcggt
gaaaataattttgaatcaggcattcctgaatcatttaatgttatgataaaagaatttaga
tctttatgtcttaacgtaaagcttgaagtaacttcaagttaa
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