Rhodoferax antarcticus: RA876_06050
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Entry
RA876_06050 CDS
T04655
Name
(GenBank) CrtD protein
KO
K09845
1-hydroxycarotenoid 3,4-desaturase [EC:
1.3.99.27
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00906
Carotenoid biosynthesis
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RA876_06050
Enzymes [BR:
rac01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.27 1-hydroxycarotenoid 3,4-desaturase
RA876_06050
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Gene cluster
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Motif
Pfam:
Amino_oxidase
DAO
FAD_binding_2
NAD_binding_8
Pyr_redox_2
HI0933_like
Pyr_redox
FAD_oxidored
FAD_binding_3
Thi4
GIDA
Pyr_redox_3
UDPG_MGDP_dh_N
Lycopene_cycl
GDI
Shikimate_DH
ApbA
NAD_binding_9
NAD_binding_7
AlaDh_PNT_C
Trp_halogenase
MCRA
FMO-like
3HCDH_N
MurD-like_N
IlvN
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
APW46007
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Position
1240917..1242455
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AA seq
512 aa
AA seq
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MADKRVVVVGAGMAGLVAALRLAHQGLQVTVIERSQVAGGKIRAQEIDGQFIDAGPTVFT
MKWVFAELMASVGTDLDRELQLSQLSVIGRHFWDDGSALDLFADAKASEAAVEMFAGAAE
AERFRKFCEMTSALYKHLEAPFIRSQVKNLPRFMLSLGPKGLALMASVGPTRTMWDSLGR
HFSDPRLRQLFGRYATYCGSSPWQAPATLNLIAQVEMDGVWSVQGGMTALAQCLVRLCKQ
NGVQFKYNTECQEILVKDGKAVGVLLPDGEVEKADVVIFNGDAAALRQGLLGEKTCRAVP
PRTGQRSLSAVTWCVSAKARGIKLDRHNLFFGRDYASEFNDIFTRKRLPEDPTLYVCAQD
RGTGLDFEGPERMLCLVNAPAVGDDDDGALAPEFLDKLQERSFQRAKDCGLQMSLETQHV
VRSTPRQFHQRFPGTGGALYGQATHGWLSIFSRPGSISPIPGLYLAGGSVHPGPGVPMAA
MSGRLAAEAIMENLGLTSRFHMEGTSGGTSMQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagcgcgttgttgtggttggcgctggcatggcggggctggtagccgctctg
cggttggcacaccaagggctgcaagttacggtgatcgaacgtagtcaggtggccggggga
aagattcgtgcgcaagagatcgatggacagttcatagacgcgggtcctacggtgttcacc
atgaagtgggtctttgctgagctgatggcgtcagtaggtactgaccttgatcgcgaactc
cagctaagccagctctccgtgattgggcgccatttttgggacgacggtagtgcgcttgac
ctgttcgctgatgcgaaggcgagcgaagccgccgtcgagatgtttgctggcgctgctgaa
gcagaacgtttcagaaagttttgcgaaatgacatcggcgctttacaagcacttagaggcg
cctttcatccgttcgcaggtaaaaaatttgcctaggttcatgctgtctcttggtccaaaa
gggttggcgttgatggccagcgttggtccaacgcgcacgatgtgggatagtttgggccgt
catttttctgacccacgtcttcgccaactgtttggtcggtatgcaacctactgcggctcg
tcgccttggcaagcgccagccactctgaatttgatcgctcaggttgaaatggacggagtt
tggtcggtgcaaggcggaatgacagccttggcgcagtgtcttgttcgcctttgcaagcaa
aacggtgttcagtttaagtacaacaccgagtgccaagagatccttgtcaaggatggcaag
gcggtcggtgttctgttgccagatggcgaagttgaaaaagccgatgtggtcatttttaat
ggtgacgcggctgcactgcgtcagggtttgttgggtgaaaaaacctgccgcgctgtgccg
ccccgaactggccagcggtcattgtcggcagttacctggtgtgtgtcggccaaggcaaga
ggcatcaaactggatcgccacaatctgttttttgggcgggactacgcatccgagttcaat
gatattttcacgcgaaagcgtttgcccgaagacccaaccttgtacgtgtgcgcccaggat
cgaggaacaggactagatttcgaagggcctgaaagaatgttgtgtttggtcaatgcacca
gccgttggagacgacgatgatggggcattagcgcccgagtttctggacaaattgcaagag
cgttcgttccagcgggcaaaagactgtggtttgcagatgtcgctagaaacgcagcatgtg
gttcgatcgacacctcgtcaatttcatcaacgttttcccggtaccgggggagcactttac
ggacaggcaacacacggatggctgagcatattttcgagacccgggtcgatcagcccgata
cccggactgtatttggcgggcgggagtgttcatccggggccgggagttccgatggcagca
atgtcagggcgtcttgcggcagaggcgatcatggagaacctcggtttgaccagtcggttc
cacatggagggtacctctggtggtacatcgatgcaatga
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