Rhodoferax antarcticus: RA876_17120
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Entry
RA876_17120 CDS
T04655
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00521
Streptomycin biosynthesis
rac00523
Polyketide sugar unit biosynthesis
rac00541
O-Antigen nucleotide sugar biosynthesis
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
rac01250
Biosynthesis of nucleotide sugars
Module
rac_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RA876_17120
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RA876_17120
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RA876_17120
Enzymes [BR:
rac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RA876_17120
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
APW47785
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All DBs
Position
complement(3530955..3531497)
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AA seq
180 aa
AA seq
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MNVIATAIPDVLVIEPKVFGDARGFFFESFNQKAFNEATGLNVNFVQDNHSRSAKGVLRG
LHYQVQQPQGKLVRVVRGAVFDVAVDIRKGSPTFGKWEGIKLTEDNHKQLWVPPGFAHGF
VVLTESADFLYKTTDYYAPEHERCIAWDDPAIGIKWPLSTHPNLSTKDQQGLALRDAAPF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattgccaccgccatccccgacgtcctcgtcatcgaacccaaagtgttcggc
gatgctcgtggctttttctttgaaagcttcaaccaaaaagccttcaacgaggctaccggc
ctgaacgtgaactttgtgcaagacaaccatagccgcagcgccaagggcgtgctgcgcggc
ctgcactaccaagtgcagcagccacaaggaaagctcgtgcgcgtggtgcgcggcgcggtg
tttgatgtggcggtggacatccgcaaggggtcacccacatttggcaagtgggagggcatt
aagttgaccgaagacaaccacaagcagttgtgggtgccgcctgggtttgcgcatgggttt
gtggtgctgactgagtcggcggactttttatacaaaaccactgattactacgcacccgaa
catgagcgatgtattgcctgggacgatccagccatcggcattaaatggcctttgtcaaca
catcctaacttgtcaaccaaagaccagcagggcctcgcgctgcgcgatgcggcgccattt
tga
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