Rahnella aceris ZF458: JHW33_09645
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Entry
JHW33_09645 CDS
T07163
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
race
Rahnella aceris ZF458
Pathway
race03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JHW33_09645 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_09645 (uvrB)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHW33_09645 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JHW33_09645 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
LIN52
SBDS_domain_II
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QQN36843
LinkDB
All DBs
Position
complement(2111373..2113379)
Genome browser
AA seq
668 aa
AA seq
DB search
MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR
FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD
PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG
QPKTKKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELHAL
REQFIAIS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagttcaaactgcattccgaatttaaaccgtcaggtgaccagcctgaggcg
atacgccgtctggaagaagggctggagaacggactggcgcaccagacattgctcggggta
accggttcaggaaaaacctttaccgtggcgaatgtgattgcggatctgaaccgtccgacg
atggtgcttgcccccaacaaaacgctggccgcacagttatacggcgagatgaaagagttc
ttccccgaaaacgccgtcgaatatttcgtctcttactatgactattatcagcctgaggcg
tatgttccgagctccgatacctttatcgaaaaagacgcctcggtgaacgaacacatcgag
cagatgcgtctttctgccaccaaagcgctgctcgaacggcgcgatgtcattgtggtggcc
tctgtttctgcgatttacggtctgggcgacccggacttatacctgaaaatgatgcttcac
ctgaccaaagggatgattatcgatcagcgttcgatcctgcgtcgtctggcggaactgcaa
tatgcacgcaacgatcaggctttccagcgcagtactttccgcgtgcgtggcgaagtgatt
gatgtgttcccggctgaatcggacgatctggcgctgcgcattgagttatttgatcaggaa
gttgaacgcctttcgctgtttgatccgctgacaggccaggtgcagcatgaagtgccgcgt
ttcaccatctacccgaaaacccactacgtcacgccacgcgaacgtattgtgcaggcgatg
gaagaaattaaagtcgaactggcggatcgccgcaaagtgctgctggccaacaacaaattg
ctggaagaacagcgcatcagccagcgtacgcagtttgatctcgaaatgatgaacgagctg
ggttattgctccggtatcgaaaactactcacgttatctgtctggccgcgggccgggcgag
ccgccgccaacgctgtttgattatttaccggctgacggcctgctgattgtcgatgagtcg
cacgtcaccattccgcaaatcggcggcatgtacaaaggcgaccgctcgcgtaaagaaacg
ctggtggaatacggtttccgcctgccttcagcgctggataaccgcccgatgcgctttgag
gaattcgaagccctggcgccgcaaagtatttatgtctcggccacgccgggcaaatacgag
ctggagaaatccggtgacgatgtggtcgatcaggtcgtgcgtccgaccggtttgctggat
ccgatcatcgaagtgcgaccggtaaccacgcaggttgatgacctgctgtctgaaatccgc
aagcgtgtggcgattaacgagcgtgtgctggtcaccacgctcaccaagcgtatggccgag
gatctgactgagtatctggaagaacacggcgagaaggtgcgttacctgcactctgatatc
gataccgtcgagcgcgtcgagattatccgcgatttgcgtctgggggaatttgacgtgctg
gtcggcatcaacttactgcgcgaagggctggacatgccggaagtgtcgctggtggcgatt
ctcgatgcggacaaggaaggcttcctgcgttctgaacgttcgcttatccagaccatcggc
cgtgcggcgcgtaacctcaacggtaaagcgattctgtacggtgataaaattaccaattca
atggcccgcgccattgaagaaaccgaacgacgtcgcgccaaacaggaagcgtacaacctc
gaaaacggcatcacgccaatggggctgaacaagaagatctccgacatcctgcaactcggt
cagccgaaaaccaaaaagaacaaagacaaacgcgatgccgaagcggcgcaaaccttcaaa
tcgcttacgccgaaagcgctggagcaacgcatcaaagagctggaaagcaagatgtatgcg
cacgcgcaaaatctggaattcgaagaggcggccaacacgcgcgacgagttgcatgccctg
cgtgagcagtttattgcgatttcgtaa
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