Rahnella aceris ZF458: JHW33_15710
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Entry
JHW33_15710 CDS
T07163
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
race
Rahnella aceris ZF458
Pathway
race03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW33_15710 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
race03019
]
JHW33_15710 (rhlB)
Enzymes [BR:
race01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JHW33_15710 (rhlB)
Messenger RNA biogenesis [BR:
race03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHW33_15710 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQN33866
LinkDB
All DBs
Position
3445363..3446655
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLAVEALEKKGFHYCTPIQALALPITLAGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAAEGRQTNQPRALIMAPTRELAVQIHSDAEALSESTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHIDLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVKELAFENMNNAESIEIEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVPQKKRLRVLE
DFTKGTLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGLSGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPPAKRLARSRTGNGPRRNSNSSSRRSS
APRSNRKRPG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctggca
gtagaagcccttgaaaagaaagggttccattactgtactcctattcaggcattggcattg
ccaatcacgctcgctgggcgtgatgttgcaggtcaggcgcaaaccggtaccggcaagacg
ctggcttttttagcgtctactttccattatctgctttctcaccctgctgcggaaggtcgt
cagactaaccagccgcgtgccttgatcatggcacctacgcgtgaactcgcggtgcagatt
cactccgacgccgaagcattatctgaatctaccgggctgaaattaggtctggcgtatggc
ggcgacggttacgacaaacagcttaaagtgctggaaagcggcgtggacatcctgatcgga
accaccggccgtttaatcgattacactaaacagaaccacatcgacctgggcgcgatccag
gtggtggtactggatgaagcagaccgtatgttcgatctgggcttcatcaaagatatccgc
tggttgttccgccggatgcctcctgctaatcaacgcctgaacatgctgttctcagcaacg
ctttcctatcgtgtgaaagaactggcgttcgaaaacatgaataatgccgagtcgattgag
atcgaaccggaacaaaaaacgggccaccgtattcaggaagagctgttctatccttcaaat
gaagaaaaaatgcgtctgttacagacgctgattgaagaagaatggccggatcgttgcatt
atttttgcaaacaccaaacaccgttgtgaagatgtctggggccatctggctgccgacgga
caccgcgtcggtttgctgaccggtgacgtcccgcagaaaaaacgccttcgcgttctggaa
gacttcactaaaggcacgctggatattctggttgcgaccgacgttgctgcccgtggtttg
cacattcctgccgtgacacacgtctttaactatgatttgcctgacgactgtgaagactac
gtgcatcgcattggtcgtaccggccgtgcgggtctgagtggtcattccatcagcctggcg
tgtgaagaatatgccctgaatctgccagcgattgaaacctataccggccacagcattccg
gtgagtaaatacaacagcgatgcgctgttaactgatttgcctcctgcaaaacgtcttgcc
cgctcgcgcaccggtaacggcccgcgccgcaacagtaattcgtcttcacgtcgcagcagt
gcaccacgtagcaaccgtaaacgtccgggctga
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