Rahnella aceris ZF458: JHW33_25120
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Entry
JHW33_25120 CDS
T07163
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
race
Rahnella aceris ZF458
Pathway
race01501
beta-Lactam resistance
race01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
race00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW33_25120
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW33_25120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_25120
01504 Antimicrobial resistance genes [BR:
race01504
]
JHW33_25120
Transporters [BR:
race02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHW33_25120
Antimicrobial resistance genes [BR:
race01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW33_25120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
DUF4232
Motif
Other DBs
NCBI-ProteinID:
QQN37616
LinkDB
All DBs
Position
pPlas2:368086..371202
Genome browser
AA seq
1038 aa
AA seq
DB search
MFSRFFVRRPVFAWVIAILIMMAGIMAIRTLPVAQYPDVAPPSVKIKATYSGANAETLEN
SVTQVIEQQLTGLDNLLYFSSSSSSDGSVDITVTFKQGTNADTAQVQVQNKVQQAESRLP
TEVQEAGVTVTKSQSSFLLIMAVYDKTDKTSSSDIADWLVSNMQDPLARVSGVGSLQVFG
AEYAMRIWLDPTKLAAYDLMPSDVETAIEAQNVQISAGKIGGLPSSTSQQLTATVRAQSR
LQTPEQFRNIIVKGNTGGAVVRISDIARVEMGSEDYTASSQLNGHPAAGMAVMLSPGANA
LDTATLVKNTISEYQRSMPKGYDVAYPKDSTEFIKVSVEDVIKTLIEAIVLVIVVMYLFM
QNLRATLIPALAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERI
MRDEGLPAREATEKSMGEISGALVAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAMI
LSVVVALTLTPALCGAFLRHKPQATRGFFGGFNRLYSRTEQRYENGVTHVQRRPVVMALI
YGAMAALMGVLMWQLPTSFLPSEDQGEVMVQYTLPAGATANRTEAVNSRVTEWFLGKEKA
NTNVIFTITGFNFSGSGQNAGMAFVSLKNWDERPGAVNTAQAVAGRAMRDLAVIRDAKVI
AMTPPSVDGLGQSNGFTFELMATGGTSRADLLKLRTELLALAAKSPELQSVRANDLPQMP
QLQVDIDNNKAVALGLTLSDVTATLSSAWGGTYVNDFIDRGRVKEVYIQGDSEFRSKPAD
LNKWFVRSSDGTSMTPFSAFATTHWTYGPESLARYNGSTSYEIQGENTDGYSSGAAMAKM
EALADKLPAGSTWAWSGLSLQEKLASGQALSLYAISILVVFLCLAALYESWSVPFSVILV
IPLGLLGASLAAELRGLNNDVYFQVALLTTIGLSSKNAILIVEFAEAALKQGSTLTAAAL
SAARTRLRPILMTSLAFIAGVMPLAVATGAGANSRIAIGTGIIGGTVTATLLAIFFVPLF
FVLVKKVFTGHKDAQESA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccgcttctttgtgcgtcgcccggtttttgcctgggtgattgcgattttgatc
atgatggccgggattatggcgatccgcacgctgccggtcgcgcagtatccggacgtcgcg
cctccctcagtgaaaatcaaagccacctattccggggctaacgccgaaacgctggagaac
agcgtcacgcaggtcatcgaacaacaactgaccggcctggataatctgctgtatttcagc
tccagcagcagttccgacggctcggtggatatcaccgtcaccttcaaacagggcaccaat
gccgataccgcgcaggtgcaggtgcagaacaaagtccagcaggcggaatcacgcctgccg
acggaagtgcaggaagccggggtaacggtcaccaagtcgcagtccagtttcctgctgatc
atggcggtgtacgataaaaccgacaaaaccagcagctcggatatcgccgactggctggtc
agtaatatgcaggatccgctggcgcgcgtcagcggcgtcggcagcttgcaggtgtttggt
gcggaatatgccatgcgcatctggctggatcccaccaaactggcggcgtatgacctgatg
ccgtcagatgtggaaacggccatcgaagcgcaaaacgtgcaaatctccgccggtaaaatt
ggcggtctgccatcttccacctcacaacaactgaccgccacggtgcgcgcccagtcacgt
ctgcaaacgccggagcagttccgtaacatcattgttaaaggcaataccggcggcgcggtg
gtgcgcatcagtgatatcgcccgcgtcgaaatgggcagcgaagattacaccgcgtcttca
caactgaacggtcatccggcggcgggtatggcggtgatgttatcgccaggcgccaacgcg
ctcgataccgccacgctggtgaaaaacaccatcagcgaataccagcgcagcatgccgaaa
ggttatgacgtcgcctatccgaaagacagcaccgaatttattaaagtgtcggtggaagac
gtcattaaaacgctgatcgaagccatcgtgctggtcatcgtggtgatgtatctgtttatg
cagaatctgcgcgccacgctgatccccgcgctggcggtgccggtggtactgctcggcacg
tttggcgtactggcgctgttcggctattccattaacaccctgacgctgttcgcgatggtg
ctggccatcggcctgctggtggatgacgctatcgtggtggtggaaaacgttgagcgcatc
atgcgtgatgaagggcttcccgcccgcgaggccaccgagaagtcgatgggagaaatctcc
ggcgcgctggtggcgattgcgctggtgctctctgccgtgttcctgccgatggcgtttttc
ggcggctcaaccggcgtgatttaccgccagttctccgtcaccattatttccgccatgata
ctttccgtggtggtagcgctgaccctgacaccggcgctgtgcggcgcttttctgcgccat
aaaccacaggctacccgtggtttcttcggcggcttcaaccgtttgtattcgcgtactgag
caacgctacgaaaatggtgtgacgcatgtgcagcgccgtccggtggtgatggcgctgatt
tacggcgccatggccgcactgatgggtgtgctgatgtggcaactgccgaccagcttcctg
ccgtctgaagatcagggcgaagtcatggtgcaatacaccctgcccgccggggcgacagcg
aaccgtaccgaagccgtcaattcccgtgttacagagtggttcctcggcaaagagaaagcc
aataccaacgtcatattcaccatcaccggctttaacttcagcggtagcggtcagaatgcc
gggatggcgtttgtgtcactgaagaactgggatgaacgtccgggcgccgtaaacaccgca
caggcagtagccggtcgcgcgatgcgggatctggcggtgatccgcgacgcaaaagtcatc
gccatgacgccgccttccgtggacgggctcgggcaaagcaacggtttcacctttgagctg
atggctaccggcggcaccagccgcgcggacttactcaaactgcgcaccgaactgctggca
ctggccgccaaaagcccggaactgcaatcggttcgcgccaatgatttgccacaaatgcca
cagttgcaggtggatatcgacaacaacaaagccgtggcgctcgggctgacgctcagcgat
gtcactgccaccctgagcagcgcgtggggcggcacttacgtcaatgatttcattgaccgt
ggtcgcgtcaaggaagtgtatatccagggcgatagtgagtttcgttccaaaccggcggat
ctgaataaatggtttgtgcgcagcagcgacggtaccagcatgacgccgttctccgccttc
gccaccacccactggacctatggcccggaaagtctggcgcgctataacggatcaacttcc
tatgagatccagggtgagaacaccgacggctacagttccggcgcggcgatggcaaaaatg
gaagcgctggcggataaattacccgccggttcaacctgggcatggagcggactctctctg
caggaaaagctcgccagcggtcaggcgctcagcctgtatgctatctcgattctggtggta
ttcctgtgtctcgccgcattgtacgaaagctggtccgtgccgttctccgtgatcctggtg
atcccgctcggtctgcttggcgcatcccttgccgccgaactgcgtggcctgaataacgac
gtttacttccaggtggcgctgctgactaccatcggtctgtcgtcgaaaaacgccatcctg
atagttgagtttgccgaagcagcgctcaaacaaggcagcaccctgaccgctgccgcgctc
tccgctgcccgcacccgtttacgcccgatcctgatgacgtcgctggcctttatcgccggg
gtgatgccgctggcagtcgcaaccggcgcaggggctaacagccgcatcgccatcggtacc
ggcattattggcggcaccgtgaccgccaccttactggctattttctttgttccgctgttc
ttcgtgctggtgaaaaaagtcttcaccggtcacaaagacgcgcaggagtcagcatga
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