Rhizobium acidisoli: CO657_25775
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Entry
CO657_25775 CDS
T06438
Name
(GenBank) ISNCY family transposase
Organism
rad
Rhizobium acidisoli
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Gene cluster
GFIT
Motif
Pfam:
HTH_29
HTH_23
HTH_28
HTH_32
HTH_IclR
rve_3
HTH_24
rve
HTH_31
Sigma70_r4
MarR_2
LZ_Tnp_IS481
HTH_1
UPF0175
HTH_20
HTH_8
Motif
Other DBs
NCBI-ProteinID:
QAS81332
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Position
pRapFH23b:29496..30917
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AA seq
473 aa
AA seq
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MSCLITMSQKELHRLELIQKIRDERLSVVQAAERLDLSRSQVHRLLQTYDRDGPAGLVSK
KRSRPSNRRHSEAFRNAALDLIRERYLDFGPTLAREKLIELHRISVAKETLRQWMTEAGI
WISRRERKKRVFQPRGRRDCFGELVQIDGSHHWWFENRGPKCALLVYIDDATGKLLHLRF
AGSENTFDYLHATKAYLQQWGKPLAFYSDKHGVFRSTHASEKDRTSGLTQFGRALYELNI
DIICANTPQAKGRVERANQTLQDRLVKEMRLRGIDTIEEANAYASEFIMDFNARFGKQPR
NPKDMHRPLADHENLDGAMCRKEVRTLSQTLTLRYDKVLFILDPTDISRPLAAQKVIVCD
YPDGRLEIMHESFALPYRTFDKLRSVHRPAVVDNKRLDDMLSVVAEMQAGRELQRSKSGP
RRTGQTDHMFGIPDGSQGNGYQKRGRKPRTDYMNDPAVIARREKALLKQPAVE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtttgatcaccatgtcgcagaaagagttgcatcgccttgaacttatccagaag
atccgtgacgaacgcctgagcgttgtccaagcagccgaacggcttgacctcagtcgaagt
caggtccatcggctgctgcagacctatgaccgggacggtccggcaggccttgtttcgaag
aaacgatcgcgtccaagcaatcgtcgccacagcgaggcgtttcgcaatgcggcgctggat
ctgatccgcgaacgctatctggatttcggtccgacgctggcgcgcgagaagctgatcgag
ctccaccggatctctgtggccaaggagacgttgcgacaatggatgaccgaggccggcatc
tggatttctcgccgggaacgcaagaaacgggttttccagccgcgcggccggcgtgattgc
tttggcgaattggtgcagatagatggctcgcatcactggtggttcgagaaccgcggcccc
aaatgcgccctgctcgtctatatcgatgacgcgaccggcaagctgttgcatcttcgcttt
gctggatcggagaacacattcgactatctgcacgcgaccaaggcctatctgcagcaatgg
ggcaaaccgctggccttctacagcgacaagcatggtgttttccgctccacgcatgcgtcg
gagaaggacaggacgagcggcctgacgcaattcggccgggcgctttatgagctgaacatc
gatatcatctgtgccaacaccccgcaggccaagggccgggtggaacgtgccaaccagaca
ttgcaggatcggctggtcaaggagatgcggcttcgcggcatcgacacgatcgaggaagcc
aacgcctatgcgtctgagttcatcatggatttcaacgcgcgtttcggcaaacagccgcgc
aatccgaaggacatgcaccggccgttggccgatcacgagaacctcgatggcgccatgtgc
cgcaaggaggttcgcacgctgtcgcagactttgacgctgcgctacgacaaggtgctgttc
attctcgatccgaccgacatttccaggcccttggccgcccaaaaggtaattgtttgcgat
tatccggacggtcgccttgagatcatgcacgagagttttgccctaccctacagaaccttt
gacaagctgcggtcggtccatcggccggcagtcgtcgacaacaagcgtctggacgacatg
ctgtctgttgtcgccgagatgcaggctggacgtgaactgcagcgcagcaagagcggtcct
cgccgcacaggtcagacagatcatatgtttgggataccggatggtagccagggcaatggc
tatcagaagcgtggccgcaaaccgaggacagattacatgaacgatccggcggtgattgca
cggcgggagaaagcgctattgaagcaaccagcggtggaataa
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