Rahnella aceris Y9602: Rahaq_3092
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Entry
Rahaq_3092 CDS
T01422
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
rah
Rahnella aceris Y9602
Pathway
rah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rahaq_3092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rah03400
]
Rahaq_3092
DNA repair and recombination proteins [BR:
rah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rahaq_3092
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rahaq_3092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
LIN52
SBDS_domain_II
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADW74686
UniProt:
A0A0H3FFA2
LinkDB
All DBs
Position
complement(3343301..3345307)
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AA seq
668 aa
AA seq
DB search
MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR
FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD
PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG
QPKTKKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELHAL
REQFIAIS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagttcaaactgcattccgaatttaaaccgtcaggtgaccagcctgaggca
atacgccgtctggaagaagggctggagaacggactggcgcaccagacattgctcggggta
accggttcaggaaaaacctttaccgtggcgaatgtgattgcggatctgaaccgtccgacg
atggtgcttgcccccaacaaaacgctggccgcacagttatacggcgagatgaaagagttc
ttcccggaaaacgccgtcgaatatttcgtctcttactatgactattatcagcctgaggcg
tatgttccgagttccgatacctttatcgaaaaagacgcctcggtgaacgaacacatcgag
cagatgcgtctttctgccaccaaagcgctgctcgaacggcgcgatgtcattgtggtggcc
tctgtttcagcgatttacggtctgggcgacccggacttatacctgaaaatgatgcttcac
ctgaccaaagggatgattatcgatcagcgttcgatcctgcgtcgtctggcggaactgcaa
tatgcacgcaacgatcaggctttccagcgcagtactttccgcgtgcgtggcgaagtgatt
gatgtgttcccggctgaatcggacgatctggcgctgcgcattgagttatttgatcaggaa
gttgaacgcctttcgctgtttgatccgctgacaggccaggtgcagcatgaagtgccgcgt
ttcaccatctacccgaaaacgcactacgtcacgccacgcgaacgtattgtgcaggcgatg
gaagaaattaaagtcgaactggcggatcgccgcaaagtgttgctggccaacaacaaattg
ctggaagaacagcgcatcagccagcgtacgcagtttgatctcgaaatgatgaacgagctg
ggttattgctccggtatcgaaaactactcacgttatctgtctggccgcgggccgggcgag
ccgccgccgacgctgtttgattatttgccggctgacggcctgctgattgtcgatgaatcg
cacgtcaccattccgcaaatcggcggtatgtacaaaggcgaccgctcgcgtaaagaaacg
ctggtggaatacggtttccgcctgccttcggcgctggataaccgcccgatgcgctttgag
gaattcgaagccctggcgccgcaaagtatttatgtctcggccacgccgggcaaatacgag
ctggagaaatccggtgacgatgtggtcgatcaggtcgtgcgtccgaccggtttgctggat
ccgatcatcgaagtgcgaccggtaaccacgcaggttgatgacctgctgtctgaaatccgc
aagcgtgtggcgattaacgagcgtgtgctggtcaccacgctcaccaagcgtatggccgag
gatctgactgagtatctggaagaacacggcgagaaggtgcgttacctgcactctgatatc
gataccgtcgagcgcgtcgagattatccgcgatttgcgtctgggggaatttgacgtgctg
gtcggcatcaacttactgcgcgaagggctggacatgccggaagtgtcgctggtggcgatt
ctcgatgcggacaaggaaggcttcctgcgttctgaacgttcgcttatccagaccatcggc
cgtgcggcgcgtaacctcaacggtaaagcgattctgtacggtgataaaattaccaattca
atggcccgcgccattgaagaaaccgaacgacgtcgcgccaaacaggaagcgtacaacctc
gaaaacggcatcacgccgatggggctgaacaagaagatctccgacatcctgcaactcggt
cagccgaaaaccaaaaagaacaaagacaaacgcgatgccgaagcggcgcaaaccttcaaa
tcgcttacgccgaaagcgctggagcaacgcatcaaagagctggaaagcaagatgtatgcg
cacgcgcaaaatctggaattcgaagaggcggccaacacgcgcgacgagctgcatgccctg
cgtgagcagtttattgcgatttcgtaa
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