Rothia amarae: IDM48_08645
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Entry
IDM48_08645 CDS
T06930
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
rama
Rothia amarae
Pathway
rama00521
Streptomycin biosynthesis
rama00523
Polyketide sugar unit biosynthesis
rama00541
O-Antigen nucleotide sugar biosynthesis
rama01100
Metabolic pathways
rama01110
Biosynthesis of secondary metabolites
rama01250
Biosynthesis of nucleotide sugars
Module
rama_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IDM48_08645 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IDM48_08645 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IDM48_08645 (rfbD)
Enzymes [BR:
rama01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
IDM48_08645 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IDM48_08645 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Motif
Other DBs
NCBI-ProteinID:
QNV39444
UniProt:
A0A7H2BIE8
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All DBs
Position
complement(1853316..1854734)
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AA seq
472 aa
AA seq
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MTKELAVHTTDIPGLLIIDLPVHGDNRGWFKENWQREKLVALGLPDFGPVQNNISFNAAR
GTTRGIHAEPWDKFVSVATGKIFGAWVDLRAGDSLGKTVTVELGPDTAVFVPRGVGNSFQ
TLEDNTAYTYLVNDHWSADAQGEYSFLNLADETVNISWPIPLEQAELSEKDKNHPRLADI
QPVQPAPLLIVGAGGQLGKELQRQLTEQNIPFIAAGRAEIDLANPSAWVDRYRWRSMRGI
INAAAFTAVDDAETPEGRRAAWAANATGVSALAQVARDAGIPLVHFSTDYVFDGTLPVGQ
KYAETDPVSPLGVYGQSKTAGEFAAQGAPRHFVVRTSWVIGDGKNFVRTMQSLAERGINP
AVVNDQFGRPTFTQELATAALHLLDSGAEYGIYNVTNSGPVISWADLATQVFELSGHDGG
RVSPTSTAEYFANVETFAPRPTNSALSLEKIAVAGFTPRSHEEALETYLREH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagagttagcggtacacaccaccgatatcccaggtctgctcattatcgatttg
ccggtccacggcgataaccggggctggttcaaagagaactggcaacgggagaaactcgtt
gcgctaggtcttcccgattttggaccggtgcagaataatatttctttcaatgcggctcgt
ggaacaactcgcggtattcacgctgagccctgggataaatttgtttcagttgccacgggc
aagatttttggtgcttgggtggatctccgcgctggggattctttgggtaaaaccgttacc
gttgagctgggtcctgatacggcggtgttcgttcctcgtggcgtcgggaattcctttcaa
accttagaagacaacactgcctatacctacctggtgaacgaccattggtcggcagacgct
cagggggagtattccttccttaaccttgcggatgaaacggtgaatatttcgtggccgatt
ccgctagaacaagcggaattatcagaaaaagacaagaatcatccgcggttagcagatatc
caacccgttcagcccgcgccacttctcatcgtcggtgccggtgggcaactcggaaaagaa
ttgcagcgtcagttgaccgagcagaatattcctttcatcgctgcaggtagagctgaaatt
gacctggctaatccttcggcgtgggttgaccggtatcgatggcgttcaatgcgcggcatc
atcaatgctgcggctttcaccgccgttgacgatgcagaaacccctgaaggacgacgcgcg
gcgtgggctgccaatgccacgggagtttctgcgcttgcacaggttgctcgcgacgctgga
attccactggtgcatttttccaccgactacgtctttgatggaacgctaccggtgggacaa
aaatatgctgagacagatccggtctctcctttgggcgtttatggccaatctaaaactgcc
ggtgaatttgctgctcagggtgcgccgcggcattttgtagtgcgtacctcctgggtgatt
ggtgatgggaagaattttgtgcgaaccatgcaatcgttggcggagcgtggaatcaatccg
gcggtcgtcaacgatcagtttgggcgccccactttcacgcaagagctagctactgccgca
cttcacttgctagattccggggcggagtacggcatctataacgtcaccaactctggtccc
gttatctcgtgggcagatcttgcaactcaggtctttgaactttcagggcatgacggcggg
cgagtctctcctacctctaccgcagagtattttgccaacgtagaaacatttgctccccgc
cccaccaactctgcattgagtttggagaagatcgcggtagcaggtttcaccccgcgctct
cacgaagaggcattggaaacgtatcttcgggaacactag
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