Rhodovastum atsumiense: RHOA_1911
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Entry
RHOA_1911 CDS
T08162
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rap
Rhodovastum atsumiense
Pathway
rap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHOA_1911 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_1911 (recF)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RHOA_1911 (recF)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
ABC_tran
AAA_15
AAA_29
SbcC_Walker_B
DUF2813
AAA_27
RecA
Motif
Other DBs
NCBI-ProteinID:
CAH2600509
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All DBs
Position
RHOA:1980793..1981923
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AA seq
376 aa
AA seq
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MRLARLALTDFRNYSELTWQPRGRVAAIWGPNGSGKTNLLEAISLLVPGRGLRGARLGEL
ARHGGRAWAVAGRFEAPEEGFDIGTGTPPGGPAERRVFRLDGAAPRSQAEIAARVAAVWL
TPQMDRLFQEGASGRRRFLDRLVFALEPGHAREVSAHDSAMAQRNRLLAEGRADAAWLAG
LEEAMARHAVAAAASRAALVGHLNAALAGGIAGAFPVARLGLVCPIAERLARDPALAVED
WLRAALATGRGADARAGSAGLGAHRADMALTDAVTGRPAGLASTGQQKALLVAVVLGHAA
LIAQARGAAPLLLLDEPAVHLDPDHRQALFAALASLPAQVFLTGTDRETFLPLRDLAEGL
RTGEDTVRPDPEFHPA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgcgcgactggcgctcacggatttccgcaactactccgagctcacctggcaa
ccgcggggtcgggtggcggcgatctggggccccaatggcagtggcaagaccaacctgctg
gaggcgatttcgctgctggtgcccggccggggcctgcgcggggcgcggctgggcgaattg
gcgcggcatggcggacgggcctgggcggtggccgggcgattcgaggcgccggaggaaggg
ttcgacatcggcaccggcacgccgcccggcggcccggcggaacggcgggtgttccgcctg
gacggcgccgcgccgcgcagccaggccgagatcgccgcacgggtggccgcggtctggctg
acgccgcagatggaccggctgttccaggaaggggcgtccggccggcggcgcttcctcgac
cggctggtgttcgcgctggagcccggccatgcccgggaagtgtccgctcacgacagcgcg
atggcgcaacgcaaccggctgctggccgaggggcgggcggatgcggcgtggctggcgggg
ctggaggaagccatggcccgtcatgcggtggccgccgcggcgtcccgcgcggcgctggtc
gggcatctgaacgcggcgctggcgggcggcatcgccggggcatttccggtggcacggctt
gggctggtctgcccgatcgccgagcgactggcgcgggatccggcgctggcggtggaagac
tggctgcgcgcggcgctcgccaccggacggggggcggatgcccgcgccggctccgcgggg
cttggcgcgcaccgcgccgacatggcgctgaccgatgccgtcaccggccggccggccggc
ctggccagcaccggccagcagaaagcgttgctggttgccgtggtgcttggccatgccgcc
ctgatcgcgcaggcgcgcggcgccgccccgctgctgctgctggacgaaccggcggtgcat
ctcgatccggatcaccgccaggcgctgttcgcggcgctggcctccctgcccgcccaggtg
ttcctgaccggcaccgatcgcgagacgttcctgcctttgcgcgacctggccgagggcctg
cgtactggcgaagacacagtgcggcccgatcccgaattccatcccgcctga
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