Rhodovastum atsumiense: RHOA_5412
Help
Entry
RHOA_5412 CDS
T08162
Name
(GenBank) Cisplatin damage response ATP-dependent DNA ligase
Organism
rap
Rhodovastum atsumiense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
CAH2604170
LinkDB
All DBs
Position
RHOA:complement(5562360..5563982)
Genome browser
AA seq
540 aa
AA seq
DB search
MTPFADLLERLAFTPGQDARIALLRRYFATTPDPDRGFGLAVLGGAPGFTAARPALLRAL
ATARTDPELFAWSHEHVGDLAETVALMWPATAPAGAAAPALAEVVTTLQAASRADLPGIV
AGWLDAISDASVRFALLRLVTGGLRTGIPARLARIAVAELAEGRITSDAIDEVWHSLTPP
YGTLFAWVEGRGPRPDPGEAPTFHPPMQAPPLHAPDLAGLDPAALRAEWKWDGLRVQLAA
TPGGRRLFSADAEDISAAFPDILAAMEFQAVLEGELLAVRDGAVAPFAELRPRLNRRTVT
ARIMRDMPVAVRLYDILFEDGEDLRPLPFDARRARLEKWHGRTRPARMDLSPMIPFTGLA
ELATLHGGTRDAAIAGLMLRRGDAPYLPGPQPGLCWTWQRDPLTRLAVLMYAQRGQARPG
SGYSDCTFGLWRPAATEGEDLVPVGKAEFAGCEQDLAWLDRWIRAHTIARFGPVREVEKA
LVLEIAFDAAQLSSRHRSGVTLRSPRIVRLRTDTPAALADRLAGLMRLVENHPVADALMA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctttcgccgacctgctggaacggctggctttcacaccgggccaggacgccagg
atcgccttgctgcgccgctatttcgccaccacgccggacccggaccgcggcttcggcctg
gcggttctcggcggcgcgcccggcttcaccgcggccaggccggcgctgctccgcgccctg
gccaccgcccgcaccgatccggaactgttcgcctggtcccatgagcatgtcggcgacctg
gccgaaaccgtggcgctgatgtggcccgccaccgcgcccgccggcgccgccgcgccggca
ctggcggaggtggtcaccacgctgcaggccgcctccagggccgacctgcccggcatcgtc
gccggctggctcgacgccatatccgatgcctcggtccgctttgcgctgctcaggctggtc
accggcggcctgcgcaccggcatcccggcgcggctcgccaggatcgcagtggcggagctg
gccgaggggcgcatcaccagcgacgcgatcgacgaggtctggcacagcctgacgcccccc
tacgggacgctgttcgcctgggtggaaggacgcggtccccggccggatccgggcgaggcg
ccgaccttccatccgccgatgcaggccccgccgctgcacgcgccggatctcgcggggctc
gatccggccgccttgcgggcggagtggaaatgggacgggctgcgcgtgcaattggcggcg
acgccgggcgggcggcggctgttctccgccgatgccgaagacatctccgccgcctttccg
gacatcctggcggcgatggagttccaggccgtgctggagggcgaattgctggccgtgcgc
gacggcgcggtggcccccttcgccgagctgcggccacggctcaaccgcaggacggtcacc
gcccggataatgcgggatatgccggtagcggtacgactgtacgacatcctgttcgaggac
ggggaggatctccgccccctgcccttcgatgcacgccgcgcgcggctggaaaaatggcat
ggtcgcacgcggccagcgcgcatggatctctccccgatgatcccgttcacgggcctcgcg
gagctggcgacgctgcacggcggcacgcgcgacgcggcgattgccgggctcatgctccgg
cgtggggacgcgccctatctgccgggtccgcagccggggctgtgctggacctggcagcgc
gacccgctgacgcgactggcggtgctgatgtatgcgcagcggggtcaggccaggcccggc
agcggatattccgactgcaccttcgggctgtggcggcccgccgcaacggagggcgaggac
ctggtgccggtcggcaaggcggaattcgccggctgcgaacaggatctggcatggctcgac
cgctggatccgtgctcacacgatcgcgcgcttcggcccggtccgcgaggtcgagaaggcg
ctggtgctggaaatcgccttcgatgcggcccagctttcctcccgccaccgttccggtgtc
acgctgcggtccccgcgcattgtgcggctgcgcactgacacgccggctgccctggccgat
cgtctggccggtctgatgcgcctcgtcgagaaccatccggttgccgatgcgctcatggca
tga
DBGET
integrated database retrieval system
