Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_1281
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Entry
Rahaq2_1281 CDS
T01770
Name
(GenBank) fatty oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq00071
Fatty acid degradation
raq00280
Valine, leucine and isoleucine degradation
raq00310
Lysine degradation
raq00362
Benzoate degradation
raq00380
Tryptophan metabolism
raq00410
beta-Alanine metabolism
raq00640
Propanoate metabolism
raq00650
Butanoate metabolism
raq00907
Pinene, camphor and geraniol degradation
raq00930
Caprolactam degradation
raq01100
Metabolic pathways
raq01110
Biosynthesis of secondary metabolites
raq01120
Microbial metabolism in diverse environments
raq01200
Carbon metabolism
raq01212
Fatty acid metabolism
Module
raq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rahaq2_1281
00650 Butanoate metabolism
Rahaq2_1281
09103 Lipid metabolism
00071 Fatty acid degradation
Rahaq2_1281
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rahaq2_1281
00310 Lysine degradation
Rahaq2_1281
00380 Tryptophan metabolism
Rahaq2_1281
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rahaq2_1281
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rahaq2_1281
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rahaq2_1281
00930 Caprolactam degradation
Rahaq2_1281
Enzymes [BR:
raq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rahaq2_1281
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rahaq2_1281
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rahaq2_1281
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Cathelicidins
Motif
Other DBs
NCBI-ProteinID:
AEX51162
UniProt:
H2INY3
LinkDB
All DBs
Position
1318635..1320839
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AA seq
734 aa
AA seq
DB search
MSDNMQNLNTTDTDAAEPASAFSLIFTAEQVGIITIDVPGEKVNTLKAEFAQQICTILQK
AQQYPGLKGLVLISGKTDSFIAGADISMISGCQTAAEATQLAQKGQTVMAQIASFSVPVV
AAIHGACLGGGLELALACHARVCSLDEKTQLGLPEVQLGLLPGSGGTQRLPRLIGAPKAL
ELMLTGRSIRAKQALRMGLVDDAVPYSVLLQTALERVAKGRKSRPPLPWQARLAGGPLGK
SVLFHFVRKQARAKTHGNYPATEKIIDVVRTGLDQGSGNGYQAEANAFGELVMTPESAAL
RSLFFASTALKKEKGGDAEPLPVRRVGILGGGLMGGGIAHVTAIKAGLPVRIKDINHEGI
RHALKYSWDLLEKKVRSRRLTRTEQQRQMMLISGTTDYSGFAQTDIVVEAVFEDLSLKQS
MVAEIEQNAALHTIFASNTSSLPIHKIAEQASRPEQVIGLHYFSPVDKMPLVEVIPHAGT
SAQTISTTVSLAKKQGKTAIVVGDRAGFYVNRILAPYINEAARCLINGEPVDHIDKALVN
FGFPVGPIQLLDEVGIDVGTKIGPILVDAFGERFAAPSGFDAVLKDDRKGRKNGKGFYFY
GQKGRAAAKKKQVDPAIYRLLNVTPKAQQSEDEIAQRCVMLMLNEAVRCLDENVIRSARD
GDLGAVFGIGFPPFRGGPFRYMDQLGLASVVKTLERLAQQYGERFTPCAGLLRRAQQGEL
FCSDGGAREKVSEV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatatgcaaaacctgaatacgacagacacggatgccgctgaaccggcttcc
gctttttcactgatatttaccgcagaacaggtcgggattatcaccattgatgttcccggt
gaaaaagtgaataccttaaaggctgaatttgctcagcaaatctgcaccattttgcagaaa
gcgcagcaatatcccggcctgaaaggtctggtgctgatttccggtaaaacagactcgttt
attgccggcgcagatatcagcatgatttcgggttgtcagacggccgccgaagccactcag
ttagcgcaaaaaggccagacggtgatggcgcaaatcgcctcattttctgtgccggtggta
gccgccattcatggagcctgtttgggtggcggactggaactggcgctggcgtgccatgcc
cgcgtgtgttcgctggatgaaaaaacgcagcttggtctgccggaagtgcaactgggttta
ttgccgggctccggcggtacgcaacgccttccgcggctgatcggcgcgccgaaagcgctg
gagttgatgttaaccggtcgcagtattcgcgcaaaacaggcgctgagaatggggctggta
gatgatgccgtgccgtattctgttttgctgcaaaccgcgctggaacgtgtggcaaaaggg
cgtaaatcgcgtccgccattaccgtggcaggcgcgtctggcgggggggcctctgggcaaa
agtgtgctgttccattttgtgcgcaagcaagcccgggcaaaaacgcatggcaattatccg
gccaccgaaaaaatcattgatgtggtgagaaccggtctggatcagggcagcggtaatggt
tatcaggccgaagccaacgcttttggcgagctggtgatgacgccggaatcagccgcattg
cgcagcctgttttttgcctccaccgcgctgaaaaaagaaaagggcggcgatgccgaaccc
ttgccggtacgccgggtaggcatcctcgggggaggcctgatgggcggcggtattgcgcat
gtgactgccatcaaagccggtctgccggtgcggattaaagacattaatcacgaaggcatc
cgccatgcgctgaaatacagctgggatttgctggagaaaaaggtgcgcagccggaggctg
acacgcactgaacagcaacggcagatgatgctgatttccggcaccacggattacagcggt
tttgcgcagacggatatcgtggtggaagcggtgtttgaggatttatcgctcaagcagtct
atggtagcggaaatagagcaaaacgccgcactgcacacaattttcgcgtcaaacacttct
tcgttgcctatccacaagattgcagagcaggccagtcgccctgaacaggtgatcgggctg
cattacttcagcccggtcgataaaatgccgctggtggaagtgatcccccatgcgggcacc
agtgcgcagactatttcgacaaccgtctcgctggcgaagaaacaggggaaaacggcgatt
gtggtcggcgaccgtgccggattctacgtaaaccgcattcttgccccttacatcaatgaa
gccgcgcgctgcttaatcaatggcgaaccggtcgatcacattgacaaagcgctggtaaat
tttggttttccggtcggccccatccagttgctcgatgaagtgggcattgatgtcggcacg
aaaattggcccgatcctggtggacgcttttggtgagcgttttgccgcaccatcgggtttt
gatgccgtgctgaaagatgaccgcaaaggacgtaaaaatggtaaaggtttctatttttac
gggcagaaagggcgggcggcggcgaagaagaaacaggtcgatccggcgatttaccgtctg
ctgaatgtcacgccaaaagcgcagcagtcagaagatgagattgcacaacgctgcgtgatg
ctgatgctcaacgaagccgtgcgctgtcttgacgagaacgtcatccgcagtgcgcgcgat
ggcgatctgggtgccgtgttcgggattggtttcccgccattccggggaggtccgttccgt
tacatggaccagttgggcctcgccagtgtggtgaaaacgctggagcgtctggcgcagcag
tatggtgagcgcttcaccccatgcgcagggttattacgccgggcgcagcagggtgaactg
ttctgttcagatggcggggcgcgcgaaaaggtcagtgaagtgtga
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