Rhodopirellula baltica: RB8970
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Entry
RB8970 CDS
T00134
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB8970 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB8970 (groEL)
03110 Chaperones and folding catalysts [BR:
rba03110
]
RB8970 (groEL)
03029 Mitochondrial biogenesis [BR:
rba03029
]
RB8970 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rba04147
]
RB8970 (groEL)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RB8970 (groEL)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RB8970 (groEL)
Chaperones and folding catalysts [BR:
rba03110
]
Heat shock proteins
HSP60 / Chaperonin
RB8970 (groEL)
Mitochondrial biogenesis [BR:
rba03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RB8970 (groEL)
Exosome [BR:
rba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RB8970 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RB8970 (groEL)
Exosomal proteins of breast cancer cells
RB8970 (groEL)
Exosomal proteins of colorectal cancer cells
RB8970 (groEL)
Exosomal proteins of bladder cancer cells
RB8970 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAD76020
UniProt:
Q7UM97
LinkDB
All DBs
Position
4779905..4781527
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQLLFEDHARARMLAGVEKLAKAVATTMGPTGRNVIIDKSFGGPTVTKDGVTVAKEIE
LEDRFENMGAKLVIEVAQKTSDLAGDGTTTATVLARAIFKEGLRNIVAGSNPTAIRRGIE
KAVEAACDQLVEMGRPVSGKQEVAHVGAISANNDNVIGELLADALERVGKDGVITVEEGK
SRNTEVEYVDGMQFDKGYVSPYFITDSSTMEASLEDALVLLYEKKVSNIRDLVPLLEKTA
QTGQPLLIIAEDVDAEALTLLVVNKLRGTLNVCAVKAPGFGDRRKAMLGDIATLTGGTLI
SEDLGMQLENVTLEHLGRAKKVTVDKSNTTIVEGAGKREDIDKRVAQIRAQIEQTDSDYD
KEKFQERLAKLAGGVAVISVGAETEAEMKQTKARLEDALHATRAAVEEGILPGGGVALVH
CREAVEAAKKKAKGDEKIGVDIVLGALDAPMRQIADNGGIDGSVVVDEVLQKNDPKIGFN
AHTGEYTDMVKAGVIDPVKVVRTALTNAASIAGLLLTTEALVTNFEQEDKDKRPVEGMVS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaattgctttttgaggatcacgctcgggcccgcatgttggccggcgtggaa
aaactggccaaggccgtcgcaacgacgatgggtcctaccggccggaatgtgatcatcgat
aaatccttcggcggtccaaccgtgaccaaagacggtgtgaccgtcgccaaggaaatcgaa
ctcgaagaccgcttcgagaacatgggtgcgaaactcgtcatcgaagtcgctcaaaagacc
agcgacttggccggcgacggaaccaccaccgcaaccgtgcttgctcgtgcgatcttcaaa
gaaggtctgcgaaacatcgttgccggtagcaacccaaccgcgattcgtcgcgggatcgaa
aaggctgtcgaagccgcttgcgatcaactggttgaaatgggacgccccgtcagcggcaaa
caagaagtcgctcatgtcggtgcaatctcggccaacaacgacaacgtgatcggcgaattg
ctcgctgacgcattggaacgagtcggcaaagacggcgtcatcacggtcgaagaaggcaag
agccgcaacaccgaagtcgaatacgtcgacgggatgcagttcgacaaaggctacgtttcg
ccttacttcatcaccgattccagcacgatggaagcgagcctcgaagacgcactcgtgttg
ctgtacgaaaagaaggtcagcaacattcgcgacctcgtgccgttgctcgaaaagaccgct
caaaccggccagcctttgctgatcatcgctgaagacgtcgacgcggaagcattgacgttg
ctggtggtcaacaaactgcgtggcacgctgaacgtgtgtgcggtcaaggctcctggtttc
ggcgatcgccgcaaagccatgttgggcgacatcgcaactctgaccggcggaacgctgatc
agcgaagacctcggcatgcagctcgagaacgtcaccttggaacacctcggtcgcgcgaag
aaagtcaccgtcgacaagtcgaacacgaccatcgtcgaaggtgctggcaaacgcgaagac
atcgacaaacgtgtcgctcaaatccgcgctcaaatcgagcaaacggacagcgactacgat
aaggaaaagttccaagagcgtttggccaagttggccggcggtgtggctgtcatcagcgtc
ggtgccgaaaccgaagctgaaatgaagcaaaccaaggctcgcttggaagacgctttgcac
gcaacccgtgctgcagtcgaagaaggcattctgcccggtggtggtgtggctttggttcac
tgccgcgaagcggtggaagctgccaagaagaaagccaagggcgacgaaaagatcggcgtc
gacattgtcttgggtgccttggacgctcccatgcgtcaaatcgccgacaacggcggcatc
gacggcagcgttgtggtcgacgaagtcctgcaaaagaatgaccccaaaatcggtttcaac
gctcacacgggcgaatacaccgacatggtcaaagctggcgtcatcgatcccgtcaaagtg
gttcgcaccgcattgaccaacgctgccagcatcgcaggcttgttgctcacgaccgaagcc
ttggtcaccaacttcgagcaagaagacaaagacaagcgtcctgtcgaaggcatggtcagc
taa
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