Rouxiella badensis: H2866_09065
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Entry
H2866_09065 CDS
T06835
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rbad
Rouxiella badensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_09065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_09065 (recQ)
03400 DNA repair and recombination proteins [BR:
rbad03400
]
H2866_09065 (recQ)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H2866_09065 (recQ)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2866_09065 (recQ)
DNA repair and recombination proteins [BR:
rbad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2866_09065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QOI57231
LinkDB
All DBs
Position
1965990..1967822
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AA seq
610 aa
AA seq
DB search
MSTAAVINKELLAEQVLRDTFGYQQFRPGQQTIINAAISGKDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRSGRIKMLY
IAPERLTMGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLVQVSSFDRPNIRYTLVEKFKPLDQLLRFVQDQRGKSGI
IYCGSRAKVEDTAARLQSRGISVGAYHAGLDNERRSQVQEAFQRDDVQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLDEKPAGPQ
QDVERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQEACGNCDICLDPPKRYDGLMDAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIREYGHDKLPIYGMGREQSNEHWISVVRQLIHLG
LITQNIAMHSALQLTEAARPVLRGEVEMQLAVPRLQTLKIRGSNTQKTYGGNYDRKLFAK
LRKLRKSLADEGNVPPYVVFNDTSLLEMAEQLPVSPGEMLGITGVGQRKLEKFGRPFMAL
IRDHIDNDDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacggcggcagtgataaataaggagttgctggcagaacaggtattgcgcgatacc
ttcggctatcagcaatttcgaccaggtcagcaaacgatcataaacgcagccatctccggc
aaagattgcctggtggtgatgccaaccggcggcggtaagtcgctgtgttatcagattcct
gcgctagtgatggacggcctgacgctggtggtgtctccgcttatctccctgatgaaagat
caggtcgatcagctgatggccgccggtgtcgaagccggatgcctgaattcaacccagacc
cgcgagcagcagcttgaggtgatggcgggctgccgcagcggtcgcataaaaatgctctac
atcgcccctgagcgtctgaccatgggcgatttccttgagcaactgcaacagtggaacccg
gcgatgctggcggtcgatgaggcgcactgtatttctcagtggggccacgacttccgtcct
gaatatcgcgcgctcggtcaactgaaattacgctatccacagctgccggtgattgccctg
acggccaccgccgacgaagcgacccgcaacgatatcgttcgcctgcttgagctcaacgac
ccgctggtgcaggtcagcagctttgaccgccccaatattcgctacaccttggtcgagaag
tttaaacctctggatcagcttttacgctttgtgcaggaccagcgcggtaaaagcggcatc
atttactgcggcagccgtgccaaggtagaagacaccgccgcgcgtctgcaaagtcgcggt
atcagcgtgggcgcttaccacgccggactggacaatgaacgccgttcccaggttcaggaa
gccttccagcgcgatgacgtgcaaatcgtggtcgcgaccgtggcctttggcatgggcatc
aacaaacccaacgtgcgttttgtggtgcattttgatatcccgcgcaatatcgagtcttat
taccaggaaacgggtcgtgcaggacgtgacggcctgcccgccgaggcgctactgctttac
gatccggccgatatggcgtggctgcgccgctgtcttgatgaaaaaccggcggggccgcag
caggacgttgaacgccacaagctcaacgcgatgggcgcttttgccgaggcgcagacctgt
cgtcgtttggtcctgctgaactactttggtgagggcaaacaggaggcctgcggcaactgt
gacatctgcctcgacccacccaaacgctatgacgggctgatggacgcccagaaggcattg
tcctgcgtttatcgcgtcggccaacgcttcggtctgggctatatcgtcgaggtgctgcgt
ggcgcgaacaatcagcgtatccgcgaatacgggcacgacaagctgcctatctacggcatg
ggccgtgaacaaagcaacgagcactggataagcgtggtgcgccagcttattcatctggga
ctgattacccagaatatcgctatgcactccgcgctacagcttaccgaggccgcaagaccg
gtgctgcgcggtgaggtcgagatgcagctggcggtgccgcgtctgcaaacgctgaagatt
cgcggcagcaatactcagaaaacctatggcggcaactatgaccgcaaactgtttgccaaa
ctacgtaagctgcgtaagtcattggcggatgaaggaaacgttccgccttacgtggtattt
aacgacacttcgctgctggagatggcggaacagctgccggtcagtccgggagaaatgctg
ggcattaccggcgtcggccagcgcaagcttgagaaatttgggcgtccatttatggcgttg
atccgcgatcacatcgataacgacgacgaatga
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