Rhizobium bangladeshense: J2J98_07555
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Entry
J2J98_07555 CDS
T07228
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rban
Rhizobium bangladeshense
Pathway
rban00521
Streptomycin biosynthesis
rban00523
Polyketide sugar unit biosynthesis
rban00541
O-Antigen nucleotide sugar biosynthesis
rban01100
Metabolic pathways
rban01110
Biosynthesis of secondary metabolites
rban01250
Biosynthesis of nucleotide sugars
Module
rban_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
J2J98_07555 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J2J98_07555 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J2J98_07555 (rfbC)
Enzymes [BR:
rban01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J2J98_07555 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSY89985
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Position
complement(1563241..1563819)
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AA seq
192 aa
AA seq
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MHIETATIEGIVAITPPRFGDHRGYFCEVFKDAWFRENVADVTFIQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIREGSPSFGKWLSQELSPETGKQLWIPAGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPMIGIRWPFDERDMVSSDKDKTLPRLADLP
SHFSYTAQQPRD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgagaccgcgaccatcgagggcattgtcgcaatcacgccgccacgtttcggc
gatcaccgcggctacttctgcgaagtattcaaggatgcctggttccgggaaaatgtggcc
gacgtcacgttcatccaggacaacgaatcgctttcagcgcaggctggaaccgtccggggg
ctgcatttccagatcccacccttcgcacagggcaagctggtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgatattcgcgagggatcgccgagcttcggcaaatggctctct
caggagctctcgccggaaaccggcaaacagctctggataccggccggtttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctacagcccg
cagcatgatcggggcatcgcgtggaacgatccgatgatcggcattcgctggcccttcgat
gagagagacatggtgtcgtccgacaaggacaagacgctgccgcggctcgccgatctgcca
agccatttttcctatacagcacagcaacccagggattga
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