Rhizobium bangladeshense: J2J98_16900
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Entry
J2J98_16900 CDS
T07228
Name
(GenBank) efflux RND transporter permease subunit
KO
K18902
multidrug efflux pump
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rban02000
]
J2J98_16900
01504 Antimicrobial resistance genes [BR:
rban01504
]
J2J98_16900
Transporters [BR:
rban02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J2J98_16900
Antimicrobial resistance genes [BR:
rban01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
J2J98_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QSY87841
LinkDB
All DBs
Position
complement(3479488..3482688)
Genome browser
AA seq
1066 aa
AA seq
DB search
MNISRFFVDRPVFAGVLSVLIVVAGLIGLRALPISEYPNVVPPSVVVRATYPGANPSVIA
ETVATPLEEQINGVEDMLYMSSQATSDGVLNVTVTFKLGTDPDKAQQLVQNRVSQAEPRL
PAEVRALGITTVKSSPDFIMVVNLVSDGESHDITYLRNYATLNIKDRLARIPGVGQVQVF
GAGDYSMRVWIDPQKAAEHDLAASDISNAISSQNVQAAAGIIGASPSQPGVDLQLNVNAQ
GRLRTPEEFGNIIVKTGANGEITRLRDVARIELGAADYTLRSLLDGKPAVAVAALQAPGS
NAIEIADNVRATMDQLQLAMPEGVKYEIVYDTTKFVRSSIEKVIDTLLEAIALVVLVVIL
FLQTWRASIIPLIAVPVSIIGTFAVMYVFGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIEHGLSPRAATYKAMKEVSGPIIAIALVLVAVFVPLAFISGLSGQFYRQFALTIAIST
VISAFNSLTLSPALAALLLKDHHAPKDWLTRFMDAIFGWFFRGFNRVFGAGSNAYGKGVG
SLVSRKSIVMVVYLALVGATYSMFTTVPGGFVPSQDKQYLIGFAQLPDAASLDRTEDVIK
RMTDIALAQPGVANAIAFPGLSINGFTNSSNAGIVFVTLKDFEERKTPDLSGGAIAMALN
QKFGVIQDAFIAMFPPPPVNGLGTTGGFKLQIEDRAGLGNQALDEATKAVLAKAYQAPEL
AGLFSSFQINVPQLYADLDRAKAEQLGVSVTDVFQTLQIYLGSLYVNDFNAFGRTYSVRV
QADAKFRAQPEDIGQLKVRSASGQMIPLSALLKVEPSTGPERANRYNGFLAADINGGPAP
GFSSGQAQAAIEKILRETLPSGIDFEWTDLTYQQILAGNSSVVVFPLALLLVFLVLAAQY
ESLTLPLAIIMIVPMGVLAALTGVWLTGGDNNIFTQIGLVVLVGLSAKNAILIVEFAREL
EFEGRTPREAAVEASRLRLRPILMTSMAFIMGVVPLVVSTGAGAEMRAAMGVAVFSGMIG
VTFFGIFMTPVFYVLLRRLTGNRPLIQHKPDEHKEEEAEVIRLAAE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctccagattttttgtcgaccggccggtttttgccggtgttctttcggtcctc
atcgttgttgccggcctgatcggcctgcgggcgctgccaatttccgagtatcccaacgtc
gtgccgccgtcggtcgtcgtgcgcgccacctatcccggagccaatccgagcgtcattgcc
gaaacggtggcgacaccgctcgaagagcagatcaacggcgttgaggacatgctttacatg
tcgagccaagcgacgtcggacggcgtgcttaacgtcaccgtcaccttcaagctgggcacc
gaccccgacaaggcacagcaactggtgcagaaccgcgtttcgcaggccgagccgcgcctg
ccggcggaagtccgtgcgctcggcatcaccacggtgaaaagctcacccgacttcatcatg
gtcgtcaatctcgtctccgacggcgaaagtcacgacatcacctatcttcgcaactacgcc
accctcaacatcaaggaccggctcgcccgcatcccaggcgtcggtcaggtgcaggtcttc
ggcgccggcgactattcgatgcgcgtctggatcgatccgcagaaggcggccgagcatgat
ctcgccgccagcgatatcagcaatgccatcagttcgcagaacgtccaggccgctgccggc
atcatcggcgcgtcgccgagccagccgggcgtcgacctgcagctcaacgtgaatgcgcag
ggccgcctgcgcacgcctgaggagttcggcaacatcatcgtcaagacgggcgccaatggc
gagattacccgccttcgcgacgtcgcccgcatcgagcttggcgccgccgactacacgttg
cggtcgctgctcgacggcaagccggctgtcgccgtggccgcccttcaggcgcccggttcg
aatgcgatcgaaatcgccgacaatgtgcgcgcaaccatggatcagctgcaattggccatg
cctgagggcgtcaaatacgaaatcgtctacgatacgacgaaattcgtgcgctcctcgatc
gagaaggtcatcgacacgctgctcgaggccatcgcgctcgtcgtcctcgtcgtcattctc
ttcttgcagacatggcgcgcctcgatcatcccgctgatcgccgttccggtatcgatcatc
ggcacctttgcggtcatgtatgtcttcggtttctcgatcaacgcgctcagcctgttcgga
ctggtgctggcgattggtatcgtcgtcgacgacgcgatcgtcgtggtcgagaatgtcgag
cgcaacatcgaacacgggctgtcgccaagagccgccacctacaaggcgatgaaggaggtc
tcaggcccgatcattgcgatcgcgctggtcctcgtcgcggtcttcgtgccgctcgccttc
atctccggcctttccgggcagttctatcgccagttcgcgctgacgatcgcgatctcgacc
gtcatctcggccttcaactcgctcaccctgtcgcctgcgctggcagctcttctcctgaag
gatcatcatgcgccgaaggactggctgacgcggttcatggacgcgatcttcggctggttc
ttccgcggcttcaaccgtgtcttcggcgcaggctcgaatgcctatggcaagggtgtcggc
agcctggtgtcgcgcaagagcatcgtcatggtggtctacctggcgctggtcggcgcgacg
tacagcatgttcaccacggttccgggcggcttcgtaccgtcccaggacaagcagtatctg
atcggcttcgcccagctgccggatgcggcaagcctcgaccgcaccgaagacgtcatcaag
cggatgaccgacatcgcgctcgcgcagccgggcgtcgcaaatgcgatcgccttccctggc
ctgtcgatcaacggcttcaccaactcctcgaatgccggcatcgtcttcgtgacgctgaag
gatttcgaggagcgcaagacgcctgatctctccggcggcgccatcgcgatggcgctgaac
cagaagttcggcgtcatccaggatgccttcatcgccatgttcccgccgccgccggtcaac
ggcctcggcacgacgggcggtttcaagctgcagatcgaggatcgtgcgggtctcggcaac
caggcgctcgacgaggctaccaaggcggtgcttgccaaggcctatcaggcgccggagctt
gccggcctgttctccagcttccagatcaacgtgccgcagctctatgccgatctcgaccgc
gccaaggccgagcagcttggagtttccgtcaccgacgtcttccagacgctgcagatctat
cttggttcgctctatgtgaacgacttcaacgccttcggccgcacctacagcgtccgtgtg
caggccgacgcgaaattccgtgcccagccggaagatatcggtcagttgaaggtccgatcg
gcgtcgggccagatgatcccgctgtcggccctcctgaaggtggagccgagcaccggcccg
gagcgggcgaaccgctataacggcttcctcgccgccgatatcaacggcggtccggcgccg
ggcttctcgtccggtcaggcacaggcggcaatcgagaagatccttcgggagacgctgccg
tccggcatcgatttcgaatggacggatctgacctatcagcagatccttgccggcaactcg
agcgtcgtcgtcttcccgctcgccctgctgctggtcttcctggtgctggccgcccagtat
gaaagcctgacgctgccgcttgcgatcatcatgatcgtgccgatgggcgtgctggcagcg
ctgacgggtgtctggctcaccggtggagacaacaacatcttcacacagatcggccttgtc
gtccttgtcggcctatcggcgaagaacgcgatcctcatcgtggaatttgcccgcgaactg
gagttcgagggccggacgccgcgcgaggccgcggtcgaagccagccgccttcgccttcgc
ccgatcctcatgacttccatggcctttatcatgggcgtcgtaccgctcgtcgtttccacc
ggtgcgggcgcggaaatgcgcgcggccatgggtgtcgcggtcttctccggcatgatcggc
gtgaccttcttcggcatcttcatgacgccggtcttctacgtgctgctgcggcggctgacg
ggcaaccgtccgctcatccagcacaagccggacgagcacaaggaggaagaggccgaggtt
atacggctagcggcggaataa
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