KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108527145
Entry
108527145         CDS       T04641                                 
Name
(RefSeq) histone deacetylase 1-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082  ATP-dependent chromatin remodeling
rbb03083  Polycomb repressive complex
rbb04110  Cell cycle
rbb04213  Longevity regulating pathway - multiple species
rbb04330  Notch signaling pathway
rbb04350  TGF-beta signaling pathway
rbb04613  Neutrophil extracellular trap formation
rbb04919  Thyroid hormone signaling pathway
rbb05016  Huntington disease
rbb05031  Amphetamine addiction
rbb05034  Alcoholism
rbb05165  Human papillomavirus infection
rbb05169  Epstein-Barr virus infection
rbb05200  Pathways in cancer
rbb05202  Transcriptional misregulation in cancer
rbb05203  Viral carcinogenesis
rbb05206  MicroRNAs in cancer
rbb05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108527145
   03083 Polycomb repressive complex
    108527145
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108527145
   04350 TGF-beta signaling pathway
    108527145
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108527145
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    108527145
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    108527145
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    108527145
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108527145
   05202 Transcriptional misregulation in cancer
    108527145
   05206 MicroRNAs in cancer
    108527145
   05203 Viral carcinogenesis
    108527145
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    108527145
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    108527145
   05165 Human papillomavirus infection
    108527145
  09164 Neurodegenerative disease
   05016 Huntington disease
    108527145
  09165 Substance dependence
   05031 Amphetamine addiction
    108527145
   05034 Alcoholism
    108527145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rbb03036]
    108527145
Enzymes [BR:rbb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108527145
Chromosome and associated proteins [BR:rbb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108527145
   HDAC complexes
    Sin3A-HDAC complex
     108527145
    BRAF-HDAC complex
     108527145
    REST complex
     108527145
    SHIP complex
     108527145
    MiDAC complex
     108527145
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108527145
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108527145
  Chromatin remodeling factors
   NuRD complex
    108527145
SSDB
Motif
Pfam: Hist_deacetyl RNA_polI_A34
Other DBs
NCBI-GeneID: 108527145
NCBI-ProteinID: XP_017723788
LinkDB
Position
Unknown
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDSLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIILAILELLKYHQRMLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYREYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESFEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGRAKCVEFVKTFNLPILMLGG
GGYTVRNVARCWTYATAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQQLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSEEEGEGGRKNASNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcacagacgcagggcacccggaggaaagtctgttactactacgacggggatgttgga
aattactactacggacaaggccacccaatgaagcctcaccgaatccgcatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccatagtgacgactacattaaattcttgcgctccatccgt
ccagataacatgtcggagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtattcgacagcctgtttgagttctgtcagttgtctactggtggttctgtggcaagt
gctgtgaaacttaataagcagcagacagacatcgctgtgaattgggctgggggcctgcac
catgcgaagaagtctgaggcatctggcttctgttacgtcaacgatatcatcttggccatc
ttggaactgctaaagtatcaccagaggatgctgtatattgacattgatattcaccatggc
gacggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataag
tatagagagtacttcccaggaactggggatctgcgggatatcggggctggaaaaggcaag
tattatgctgttaactacccgctccgagatgggattgatgacgagtcctttgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcctagcgcggtggtcttacag
tgtggctcagactccctgtctggggatcggttaggttgcttcaatctaaccatcaaaggg
cgcgccaagtgtgtggaatttgtcaagacctttaacctgcctatactgatgctgggaggt
ggtggttacaccgttcgtaatgttgcccggtgctggacatacgcgacagctgtagccctg
gatacggagatccctaatgagcttccatacaacgactactttgaatactttggaccagat
ttcaagctccacatcagtccttccaacatgactaaccagaacacgaatgagtacctggaa
aagatcaaacagcagctctttgagaaccttagaatgctgccgcatgcacctggagtccaa
atgcaggcgattcctgaggacgccatccctgaggagagtggcgatgaggacgaagaagac
cctgacaagcgcatctcgatctgctcctccgacaaacgaattgcctgtgaggaagagttc
tccgattctgaagaggagggagaggggggccgcaagaacgcttccaacttcaaaaaagcc
aagagagtcaaaacagaggatgaaaaagagaaagacccagaggagaagaaagaagtcaca
gaagaggagaaaaccaaggaggaaaagccagaagccaaaggggtcaaggaggaggtcaag
ttggcctga

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