Rickettsia bellii RML369-C: RBE_1153
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Entry
RBE_1153 CDS
T00339
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rbe
Rickettsia bellii RML369-C
Pathway
rbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBE_1153 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbe03021
]
RBE_1153 (rpoB)
03400 DNA repair and recombination proteins [BR:
rbe03400
]
RBE_1153 (rpoB)
Enzymes [BR:
rbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBE_1153 (rpoB)
Transcription machinery [BR:
rbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBE_1153 (rpoB)
DNA repair and recombination proteins [BR:
rbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBE_1153 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF5121
Dsl1_N
RelB
Motif
Other DBs
NCBI-ProteinID:
ABE05234
UniProt:
Q1RHD0
LinkDB
All DBs
Position
complement(1246538..1250656)
Genome browser
AA seq
1372 aa
AA seq
DB search
MVSLRDNIEVQPLSHNKRVRKNFGHINLVADIPNLIEIQKNSYEKNFLQLDTKDSERKNK
GLQSILNSIFPISDPSNIANLEFVKYEFDTPKYDVEECTQRSLSYDSALKVTLRLSIWDI
DEDTGSREIKGIKEQQVYMGNIPLMTKNGTFIINGTERVVVSQMHRSPGVFFYHDEGKVH
SSRKLLYSARVIPYRGSWLDLEFDAKDIIYFRIDRKRKLYATTLLKAIGMSTEEIIKFYY
DSVNYKVVKNKGWAVKFMPSHITAHRLTSDLIDADTGNVLLKAGQKITPRLAKKYAGEGL
NNILVSHKALIGKYLSEDLKDPESDEILAKIGEMITVELLSVISDLKIKNISVLVINPQS
GPYIRNTLFSDKNQDRESALFDIFRVLRPGEPANIEAAESLFYNLFFDPERYDLSEVGRI
KMNSRLELNISDETTVLTTDDIKNILRVLVELKDRKGIIDDIDHLGNRRVRSVGELIENQ
FRIGLVRMEKSVVERMSAGDIDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSE
ITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINK
HGFIESPYRKVKDGHVTDEVVYLSAIEEGKYKIGQANSKVDKDGILQGEFINCRVEGGNF
VMVEPHEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPFVGT
GVEGVVAKDSGASVLALNDGIVEQVDSNRIVIRAIAQKTESAPSVDIYNLLKFQKSNHNT
CINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIV
KEDVFTSVHIEEFEVIARDTRLGPEEITRDIPNVSEEALRHLDEVGIIYVGAEVKAGDIL
VGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRVFSRRGVEKDQ
RAIAIEKQQIEKLAKDRDDELEIIEHFVFSWLEKLLVGQVSINGPKTVKTGQTITSEILK
GLSKGQLWQFTVEDANVMNEIEQLKGHYDGKKEALNKRFATKVEKLQSGDDLPQGALKVV
KVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIG
QVLETHLGWASVNLAKKIAGLVEEHKTKHASIEKIKKFLIELYGENINHILEKSDEEIIS
FCNEAAKGVYFATPVFDGAKVEDVKDMLRLAGQDLSGQVKLIDGRTGEYFDRLVTVGQKY
LLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEML
TVKSDDVNGRIKIYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVTS
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaagggataatattgaagtacaacccttgtcacataataaaagagtaaga
aaaaattttggtcatataaatttagtagcagatataccgaatttgattgaaattcaaaaa
aattcatatgaaaaaaattttctacagctagatacaaaagattccgaaagaaaaaataaa
ggcttacaatctatattaaattcaatttttcctatctctgatccttctaatatagctaat
ttagaattcgttaaatatgaatttgatactccaaaatatgatgtggaggaatgcactcaa
agaagcttaagctatgattctgctcttaaagtaaccttaagattaagtatctgggatata
gacgaagatactggaagccgagagattaaaggtatcaaagagcagcaagtatatatgggt
aatatcccattaatgactaaaaatggtacttttatcattaatggtacagaaagggtagtt
gtatcgcaaatgcatcgctcacctggggtattcttctatcatgatgagggcaaagttcat
tcttctagaaaacttttatattctgcacgtgttattccatatagaggatcatggcttgat
ttagagtttgatgctaaagatattatttattttagaatagatagaaaaagaaaactttat
gctactactttgcttaaagcaataggcatgagtacagaagaaattataaaattttattat
gattcagtaaattataaagttgttaaaaataagggatgggcagttaaatttatgcctagc
catattactgctcatagattaacaagtgatttaatagatgctgatacgggaaatgttttg
cttaaagcagggcaaaaaattactcctcgcttagctaaaaaatatgctggggaaggactt
aataatattttagtatctcataaagctttgattggtaaatatttatctgaggatttaaaa
gaccctgaaagcgatgaaatattagcaaaaatcggtgaaatgattactgttgaattactt
agtgtaattagtgatcttaaaattaaaaatattagcgtattagtaattaatcctcaatct
ggtccatatataagaaatactttattttctgataaaaaccaagatcgtgaatcagcatta
tttgatatttttagagtattaagaccgggagagcctgctaatattgaagctgctgaaagt
ttattttataatttattctttgaccctgaaagatatgatctttcagaagtaggtcgaata
aaaatgaattcaaggttagaactaaatatctctgatgaaactactgttttaactacagat
gatataaaaaatatactaagagttttagtagagcttaaagatcgcaaagggattatagac
gatattgatcacttaggtaacagaagggttagatcggttggtgaattgatagaaaatcaa
ttcagaataggtcttgtccggatggaaaagtcagtagttgaaagaatgtcggcaggtgat
attgatacagtaatgcctcacgatttagtgaattccaaaattttagtttctgtagtaaag
gaattcttcagtacttcgcaattatcccaatttatggatcaaacaaatccattgtctgaa
ataactcataaaagaagattatcagcattagggcctggtggtcttagtcgtgatagagca
ggttttgaagtgcgtgatgtgcatccgactcattacggtcgtatctgtcctattgaaaca
cctgaaggtcaaaatatcggactaattaactctatggcaacttatgctagaataaataag
catggttttatagaaagcccatatagaaaagtcaaagatgggcatgtaaccgatgaagta
gtatatctttcagctattgaagaagggaagtataagatcggtcaagcaaattctaaggtt
gataaagatgggatattacagggcgaatttattaattgccgagttgaaggtggcaatttt
gtaatggtagagccacacgaagtagacttcattgatgtaacgcctatgcaggttgtatct
gttgcagcttctcttataccgttcttagaaaatgatgatgctaaccgtgctttgatggga
tcaaacatgcaaagacaagcggttcctttaattaaaactgatgcaccttttgtgggtaca
ggagttgagggagtagtagcaaaagattctggagcatctgtgcttgcattaaatgatggt
atagttgagcaagtagattcaaatagaattgtaattagagctattgctcaaaaaaccgaa
agtgcaccttcagttgatatttataacttattaaaattccaaaaatctaatcataatact
tgtatcaatcaaaaacctttagttaaggtaggtcattatgttaagaagaatgatattata
gctgacggacctagtaccgataatggtgaaattgctttaggcagaaatgttttagtcgct
ttcttgccttggaatggatacaattttgaagattcaattttaatatcagagcgaatagta
aaagaagacgtatttacttctgtccatattgaagagtttgaagtaatagcaagagatact
cgccttggtcctgaagagattactcgtgatataccgaacgtaagcgaggaagctctgcgt
catttagatgaagtcggaataatttatgtaggtgcagaagtaaaagcaggtgatatttta
gtagggaaagtaacgccgaaaagtgaatcacctattactcctgaggaaaaattactgaga
gctatttttggagaaaaagcttttgatgtgaaagattcatcgctgcatgttccttccggg
gttagcggaacggtagtagaagtaagagtattctctcgtcgaggtgttgaaaaagatcag
cgtgctattgctattgaaaaacaacaaattgagaaattagcaaaagaccgtgatgatgaa
ttagaaattattgagcattttgtatttagttggcttgagaagcttttagtaggacaggta
agtattaatggtcctaagacagtaaagactgggcaaactattacaagcgaaatattaaaa
ggtttatctaaaggacaactttggcagtttactgttgaagatgcaaatgtaatgaacgaa
atagagcagctaaaaggtcattatgatggcaaaaaagaagctcttaataagaggttcgct
actaaggtagaaaaattacaaagcggagacgatttacctcaaggtgctttaaaagtagta
aaagtatttatcgcaactaagcataaattacaacctggtgataaaatggcaggaagacac
ggaaataaaggtgttatttcacgtattgtgccagaagaggatatgccattcttagaagat
gggactgtagttgatattgttctcaatcctttaggtcttccttctcgtatgaatataggg
caagtgcttgaaactcatcttggttgggcatcagtgaatctagcaaaaaaaatagcaggt
ttagtagaagaacataaaactaaacatgcaagtattgagaagattaagaagtttttaatc
gagctatatggtgagaatattaatcatatacttgaaaaatctgacgaagaaattatttca
ttctgtaatgaagctgctaagggagtatattttgcaactccagtatttgatggtgcaaag
gttgaagacgttaaggatatgctaaggcttgcaggtcaagatctttcagggcaagtaaag
ctaattgatggtagaacaggtgaatattttgatcgcttagtaactgtagggcagaaatat
ttattaaagctacatcacttggtagataataaaattcactctcgttctataggtccttat
agtttagtgactcagcaacctcttggaggaaaatcgcattttggtggtcagcgtttcggg
gaaatggaatgctgggcattacaagcatatggagctgcttatacgttacaagaaatgtta
actgttaaatcagatgacgtaaatggtagaattaagatttatgactctatagtgcgtggt
gaaaataattttgaatctggtattcctgaatcatttaacgtgatgataaaagaatttaga
tctttatgtcttaatgtaaaacttgaagtgacttcttaa
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