Rhodobaca barguzinensis: BG454_04685
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Entry
BG454_04685 CDS
T05218
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rbg
Rhodobaca barguzinensis
Pathway
rbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG454_04685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_04685
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG454_04685
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BG454_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
UB2H
AAA_19
AAA_16
AAA_22
Kinesin
AAA
TrwB_AAD_bind
eIF3_p135
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ATX67683
UniProt:
A0A2K8KI78
LinkDB
All DBs
Position
complement(973995..976172)
Genome browser
AA seq
725 aa
AA seq
DB search
MPHNNLNLPAQRPDVLTRPKLEGGRQFRMASPFLPAGDQPTAIAELVEGVQSGEQNQVLL
GATGTGKTYTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDFEKGESYNQRQVLAELVAQQYRRNDAAFQRGSFRVRGDVIELWPAHLDDRAWKLSFFG
EELEAITEFDPLTGAKTDSFDQIRVYANSHYVTPRPTMQQAIKGIKHELQQRLDQLIAEG
KLLEAQRLEQRTKFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WELEQTGGVFTEQVIRPTGLIDPEVEIRPVQMQVDDLLDEIRKVAAKDLRVLCTVLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLVQTIGRAARNADGRVIMYADRITGSMERALNETNRRREKQIAY
NEAHGITPQTVKKNVEDVLAGLWQGDTDMARVTAQVDKVKPGANLQAHLEGLRADMRKAA
ENLEFEEAARLRDEVKRLEAVELAIADDPLARQSAVDDAVDHAVKPRSTAGRPGQRGGVK
RRGKR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgcataacaacctgaacctgcctgcccagcgccccgatgtcctgacccgccccaaa
ctggaaggcggcaggcagtttcgtatggccagccctttcctgcccgcaggcgaccagccc
acagcgattgcggaactggtcgaaggcgtgcaatcgggtgaacaaaatcaggtgcttctg
ggcgcaacgggtacgggcaaaacctacacgatggccaagatcatcgaggaaacacagcgc
cccgcgatcatccttgcgccaaacaagacacttgcagcccagctttatggcgaattcaag
gggttctttcccgacaacgcggtcgagtatttcgtcagctattacgactattaccagccc
gaagcctatgtcgcgcggtccgatacctatattgagaaggaatcccagatcaacgaacag
atcgaccggatgcgccattcggccacccgcgcgcttctggaacgcgatgatgtgatcatc
gtggcctctgtctcctgcatctatggcatcggctcggttgagacgtattcggccatgacg
caggatttcgagaagggcgaaagctataaccagcggcaggttctggcggaacttgtggcc
cagcagtaccggcgcaacgatgccgcattccagcgcgggtcgttccgcgtgcgcggtgac
gtgatcgaattatggcctgcccatctggacgaccgcgcatggaaattgtcgtttttcggc
gaggagctggaagcgataaccgagtttgaccccctgacaggtgcgaaaactgacagtttc
gatcagatcagggtctacgccaacagccattacgtgaccccgcgcccgaccatgcagcaa
gcgatcaagggcatcaaacatgaattgcagcagcgccttgaccaattgattgccgaaggc
aagttgctggaagcccagcgcctggaacaacgcaccaagttcgatctggaaatgcttgaa
gccaccggcgtatgcaacgggatcgagaattactcgcgctatctgacagggcgcgcaccg
ggcgaaccgccccccaccctgtttgaattcatcccggacaacgcgattgttttcgcagac
gagtcgcatgtcagcgtgccgcagatcggcggcatgtatcgcggcgactaccggcgcaaa
ttcacgctggccgaacacgggttccggctgccctcctgcatggacaatcgcccgctcaaa
ttcgaggaatgggacgccatgcgcccgcaatcggtgtttgtatccgcaaccccggccgca
tgggaactggaacagacgggtggggtgtttacggaacaggtcatccgccccaccgggctg
atcgaccctgaagtggagattcgacctgtccagatgcaggtcgatgatctgctcgatgaa
atccgcaaggttgctgcaaaggacctgcgcgtgctgtgcaccgtcctgaccaaacgcatg
gccgaggatctgaccgaatacctgcacgagcagggcatccgcgtgcgctacatgcactct
gatatcgacacgattgaacgtatcgagatcctgcgcgacctgcgactgggcgcgtttgat
gtcttgatcggcatcaacctgctgcgcgaggggctggatattcccgaatgcgggttggtt
gccattctggatgcggacaaagaggggttcctgcgctctgaaaccagccttgtccagaca
atcgggcgcgctgcacgcaatgccgatgggcgcgtgatcatgtatgccgaccggatcacc
ggctctatggagcgcgcgctgaacgaaaccaaccggcggcgcgaaaaacagatcgcctat
aacgaggcgcatgggatcacgccccagaccgtcaagaagaatgtcgaagatgtgctggcc
gggctttggcagggcgacacggatatggcccgcgtgaccgcgcaggttgacaaggtaaaa
cccggcgcgaacctgcaagcccatcttgaagggctgcgggccgatatgcgcaaggccgcc
gaaaatctggaattcgaggaagccgcccgcctgcgtgatgaagtgaaacggctggaggca
gttgaacttgccattgcggatgatccgctggcgcgccaatccgccgtggatgatgctgtt
gaccatgcggtcaagccgcgctcgaccgcagggcgaccgggacagcgtggtggcgtaaag
cgccggggcaaaagatga
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