Rhodopseudomonas boonkerdii: E0H22_25195
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Entry
E0H22_25195 CDS
T07799
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk01501
beta-Lactam resistance
rbk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E0H22_25195
01503 Cationic antimicrobial peptide (CAMP) resistance
E0H22_25195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_25195
01504 Antimicrobial resistance genes [BR:
rbk01504
]
E0H22_25195
Transporters [BR:
rbk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E0H22_25195
Antimicrobial resistance genes [BR:
rbk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E0H22_25195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UGV28651
LinkDB
All DBs
Position
complement(5533852..5536959)
Genome browser
AA seq
1035 aa
AA seq
DB search
MISSVFISRPRLAIVIAFVTCIAGLLALTQIPVAQFPDIVPPQVTVSGTFPGASASVVEA
SVAQPLEAQVVGVDKMLYMKSTSGNDGTYTLTASFALGSNPDINTVNVNNRVQAALAQLP
QEVQLQGLTVQKKSSAILQFVVLYSENGEQDPVFITNYAVVNVLDAISRTPGVGQASLFA
KMNYSMRIWFDTQRLTSLNLAPSDVVNAIRAQSTQAAVGRVGARPISDDQQFQFNVQTQG
RLSTPEQFAKIVLRANPDGSILTVGDVARVEIGAQNLDSESRIDGRPGVGIGIYLAPGAN
AVTTAAAVQDTLKKLSPRFPLGLKYLVQFDTTTFVADTIHEVLRTLGEAFVLVVIVVYLF
LGSLRATIVPTIAVPVSLIGSFAVLLAMGYSANTVSLLAMVLAIGIVVDDAIVVVENVER
VMEEEPDLSPTEATRKAMSQITAPIIAITLVLLSVFVPIAFIPGVSGTLFRQFAVTISAA
MLISAINALTLSPALCAIFLRHSGPRKGFIAKVMRGIDWSRDKYAGGVRRLVRVSAFSLV
AVAVFAVGIFGLSRITPTGFLPEEDQGAFFVMVQLPNGASVGRTGEVTKQVEEIVKKIPA
VSHTMSIVGYSLLDGGALPNNAFMVVRLKPFEDRNAAADAAQSVIRQVFREGQKVREANV
VAFNLPPVIGLSTGGGFEYVLEALEGQDPAAMNSVTGGLLAAANKDPELARVFSTFTASN
PSLYLDIDRAKAQALGLNMSDVFTALQATLGGVYVNNFNMLGRTWQVNVQGEAANRNDIR
DIWQIYVRNNRNEMVPLRSIAEMKTELGPQVITRYNNYRAITVNGGPAPGVSSGTALEAM
TKVSNDTLPLGYSFEWTGTAYQEQAASGQTGMILGLAVLFAYLFLVALYESWTIPIPVLL
SVVVGVLGSFIGLKIAGLSLDLYGQIGLVVLIALAAKNGILIVEFAKEQREAGHDIVSAA
ISGAEMRFRAVMMTSVAFILGLMPLVIATGAAQISRRAVGTAVFGGMIAASSIGIFLIPM
LYVVFQRLRERIRGG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgatctcttcggttttcatcagccgaccaaggttggccatcgtcatcgcgttcgtgacc
tgtattgcgggcctgttggcccttactcagattccggtcgcgcaatttcctgatatcgtt
ccgccgcaggttaccgtcagcggaacgtttcccggcgcttccgcttcggtggtggaagcg
agcgtggcgcagcccctcgaagcgcaggtcgtaggcgtcgataagatgctctatatgaaa
tcgaccagcggcaacgatggcacctacacgctcacggccagctttgcgctcggatcgaac
cccgacatcaacaccgtcaacgtgaacaaccgggttcaggccgccctggcgcagttgccg
caggaggtgcagctccagggactgacggtacagaagaagtcttcggccatcttgcaattc
gtcgtcttatacagcgagaacggcgagcaggacccagtcttcatcacaaattatgccgtg
gtcaacgtccttgacgcgatttcgcgcacgccaggcgtcggtcaggcatcgttgttcgcg
aaaatgaattattcgatgcggatctggttcgatacccagcgtctgaccagcctcaatctc
gctccctcggatgtcgtgaacgccattcgcgcccagagcacgcaggcggccgttggccgc
gtcggtgcccgtccgatcagcgacgatcagcagtttcagttcaacgtgcagacccagggg
cggctatcgacgcccgagcagttcgcgaagatcgtgctgcgggccaatccggacggctcg
attctcaccgtcggcgacgtggcccgcgtcgagatcggcgcccagaacctggactcggag
tccaggatcgacggacgcccgggcgttggcatcggcatctacctcgctcccggcgccaat
gcggtgacgacggccgctgccgttcaggatacgttgaaaaaactttcgccgcgcttcccc
ctaggcctgaaatacctcgtccagttcgacaccaccacgttcgtagccgacacgatccac
gaagtcctccgaacgcttggcgaagcattcgttctcgtcgtcattgtcgtctaccttttt
ctcggcagtcttcgggctaccatcgtgccgaccattgccgtgcctgtcagcctgatcggg
tcgttcgctgtccttttagcgatgggctattcggccaacacggtttcgttgcttgcgatg
gtacttgcgatcggcatcgtggtcgatgatgccatcgttgtcgtcgagaacgtcgaacgc
gtgatggaggaggagccggatttgtcgccgacggaagcgacgcgcaaggcgatgtcccag
atcacagcgccgatcatcgcgatcacgctcgtcctgctgtcggtgttcgtccccatcgcc
ttcataccaggggtttcgggcaccttgttcagacaattcgccgttacgatcagcgccgcg
atgcttatatcagctatcaatgccctgaccttgtcgccagccctttgcgcgatcttcctg
cggcattccggaccgcgtaaaggtttcatcgcgaaagtcatgcgagggatcgactggagt
cgcgacaaatacgcgggcggggtccgacgtcttgtccgagtctcggctttttcacttgtc
gcagttgcagtatttgctgtcggcatcttcggcctgtcccggatcacgcctaccgggttc
cttccggaagaggatcagggcgcgttcttcgtgatggtccagttgccgaacggtgcctcc
gtcggtcgcaccggtgaggtgacgaaacaggtcgaagagatcgtcaagaagatcccggct
gtaagccatacgatgtcgatcgtcgggtattctctgctcgatggcggcgccttgccgaac
aatgcgtttatggtcgttcgccttaagccgttcgaggaccgcaatgctgcggccgatgcg
gcgcaaagcgtgattaggcaggtgttccgggaaggacagaaggtccgagaggcgaatgtc
gtcgcattcaaccttccacccgtgatcggtctctcgacgggcggcggctttgaatacgtg
ctcgaagctctggaaggacaagatcctgcggccatgaacagcgtcacgggcggcctgctt
gcggccgccaacaaggatccggaactggcacgcgtgttctctaccttcaccgcgtcgaac
ccgtctctttatctcgacatcgatcgcgccaaggcgcaggccctgggtctcaacatgagt
gatgtcttcaccgcgttgcaggcaacgctcggcggcgtttacgtcaacaacttcaacatg
ctcggtcgaacgtggcaggtgaacgtccagggcgaggccgcgaaccgcaacgacatccgc
gatatttggcagatctatgtccggaacaatcggaacgagatggtgccgctccggtcgatc
gctgaaatgaaaacagagctcggcccgcaggtgatcacgcgctacaacaactatcgagca
atcaccgtcaacggcggtcccgcgccgggcgtttcgtccggtaccgcgctggaggcgatg
acgaaggtgtcaaacgacacgcttccgctcggttacagcttcgaatggacgggcaccgcg
tatcaggaacaggccgcttccggacagacgggaatgatcctcggtcttgccgttttattc
gcttatctgttcctcgtcgcactctacgagagctggactatcccaatcccggtcctgctg
tcggtggtcgtcggcgtgctcggatcgtttatcggcttgaagattgccggacttagtctc
gacctctacggccagatcggtctggtcgtgctaattgctctggcggcgaagaacggcatt
ctgatcgtcgagttcgccaaggagcagcgggaggcggggcacgacatcgtgtcggccgcg
atctcgggtgcagagatgcgtttccgcgccgtgatgatgacgtcggtagcattcatcctt
ggtcttatgccgttggtcatcgcgacgggcgccgctcaaatcagccgcagggcagtgggg
accgcagttttcggtggaatgattgcggcgagctccatcggcatcttcctgatcccgatg
ctatatgtcgtcttccagcggctccgggagcggattagaggaggttag
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