Rhizobiales bacterium NRL2: TEF_03100
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Entry
TEF_03100 CDS
T04419
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
rbm
Rhizobiales bacterium NRL2
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbm03400
]
TEF_03100
DNA repair and recombination proteins [BR:
rbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
TEF_03100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
UPF0547
SWI2_SNF2
AAA_16
zinc_ribbon_2
DZR_2
C5HCH
AAA_30
DZR
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ANK79893
LinkDB
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Position
663031..664713
Genome browser
AA seq
560 aa
AA seq
DB search
MIPRDYQRAAVDAAHDRTAEHGNTLLVLPTGAGKTAIAGFFVGEQAERRREFRTLVLQHT
DELIDQNRTAIGKVSGLATSVVKAEQDCWDGQVVFGSVQTLARTNRRQSMPEFTHLVIDE
CHRAAAQSYQSIIAHARDLNPGLRLLGLSATPGRGDGRSLRKTFSNVGYHLRIGTLIARG
LLVPPRTFTIDLGVKDELAGIDSTAGDFDMRQADKVLNRSVLNETVVEHWKDKAADRRSI
FFCSTVAHAEAVAEAFRADGISAETITGDMAPRARADLIARFDRGEVQVLTNCMVLTEGF
DSQPVGCIGILRPMLHKGTFVQAVGRGLRRVDPERFPAIVKTDCIVLDFAGAALRHGTLE
QDIGLEDDEPSAGEQPWKTCPSCEAELPLGASLCDFCGHVFTRETGEKRLLASFEMTEID
LLDRSPFSWCDLHGDGQALMASGFQGWAGVFHDGTLWHALGHPKGRALRTLAIGTRVQAL
AAADDFLRETETTSASAKSRRWLNDPATMRQIELLHRAGQPADGLDFGLSKYAANCHLNF
RWNRSAIRAAVLRDAARSAA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcgcgattatcagagggcggccgtggacgcggcccacgaccggacagccgaa
cacggcaacacgttgctcgtgctgccgaccggcgccggcaagacggcgatcgcgggcttc
ttcgtgggcgagcaggccgagcgacgccgtgagttccgcaccctcgtcctgcagcacacg
gacgagctcatcgaccagaaccgcaccgccatcggcaaggtctccggcctcgcgacctcc
gtcgtaaaggccgaacaggattgctgggacggccaggtcgtcttcggcagcgtccagacg
ctggcgcggacgaaccggcggcagtccatgccggaattcacccatctcgtcatcgatgag
tgccatcgggcggcggcccagagctaccagtcgatcatcgcgcatgcccgcgacctgaat
ccggggctcaggctgctggggctgtccgccacgcccggccggggcgacggccggagcctg
cgcaaaaccttcagcaatgtgggctaccacttgcggatcggcacgctcatcgcgcgcggg
ctgctggtcccgccgcggaccttcaccattgatctcggcgtgaaggacgagctcgccggc
atcgacagcaccgccggcgacttcgacatgcgccaggcggacaaggtgctgaaccgttcc
gtcctcaacgagacggtggtcgagcactggaaggacaaggcggcggaccggcgcagcatt
ttcttctgttcgacggtcgcccatgccgaggccgtggccgaggcgttccgagccgacggc
atctcggccgagacgatcaccggcgacatggcgccccgggcgcgtgcggatctgatcgcg
cggttcgaccgcggcgaggtgcaggtactcaccaactgcatggtgttgaccgagggcttc
gacagtcagcccgtcggctgcatcggcatcctgcgcccgatgctccacaagggcacattc
gttcaggccgtcgggcgcgggctgcgccgggtcgatcccgaacgctttcccgctatcgtc
aagaccgactgcatcgtgctggacttcgccggtgccgcgctgcgccacggtacgctcgaa
caggacatcgggctcgaagacgacgagccgtccgccggcgagcaaccctggaagacctgc
ccctcctgcgaggcggagctgccgctcggcgcgtccctctgcgacttctgcggccacgtc
ttcacccgcgagaccggcgaaaaacggctgctcgcgtccttcgagatgaccgagatcgat
ctgctcgatcgatccccgttctcatggtgcgacctgcacggcgacggccaggccctgatg
gcgagcgggtttcaggggtgggcgggcgtcttccacgacggcacgctctggcacgctctc
ggccacccgaaggggagagcgctccgcaccctcgccatcggcacccgcgtccaggcgctc
gccgcggccgacgacttcctgcgggagaccgaaaccaccagcgcctcggccaagagcagg
cgctggctcaacgacccggccaccatgcgacagatcgagctgctgcatcgtgccggccaa
ccggccgacggcctcgacttcggtctgtcgaagtacgccgccaactgccatctgaacttc
cgctggaatcggagcgccatccgcgcggccgttctgcgggacgcggctcggagcgcggcg
tga
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