Rhizobiales bacterium NRL2: TEF_03900
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Entry
TEF_03900 CDS
T04419
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00521
Streptomycin biosynthesis
rbm00523
Polyketide sugar unit biosynthesis
rbm00541
O-Antigen nucleotide sugar biosynthesis
rbm01100
Metabolic pathways
rbm01110
Biosynthesis of secondary metabolites
rbm01250
Biosynthesis of nucleotide sugars
Module
rbm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TEF_03900
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TEF_03900
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TEF_03900
Enzymes [BR:
rbm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TEF_03900
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ANK83262
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All DBs
Position
838448..839053
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AA seq
201 aa
AA seq
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MSSESQLATRSWIDRSTGRLRVEATAIPEVRIVRPARHGDGRGFFSEVWNRRALAEAGIE
ADFVQDNHVLNGRSGTLRGLHLQLAPSPQAKLVRCLSGAILDVAVDVRRGSATFGRHVAV
ELSGENWAQLWVPEGFAHGYCTLTDGAEVIYKVTGYYDAQAERGVRFDDPALGIDWPVEP
AAAILSEKDRAWPDLAGFGGV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaatcgcagcttgcgacaaggtcgtggatcgatcgctctacgggtcggctc
cgggttgaggcgacggccattcccgaagtgcggatcgtccggcccgcgcggcacggcgac
gggcgcggcttcttctccgaggtctggaaccggcgcgcgctggccgaggcgggcatcgag
gccgacttcgtgcaggacaaccacgtcctgaacggccggtccgggacgctgcgcggcctg
cacctgcagcttgcgcccagcccgcaggccaagctggtgcgctgtctcagcggcgccatc
ctcgacgtcgcggttgacgtccgccgcggctcggccaccttcgggcggcacgtggccgtc
gagctttcgggcgagaactgggcgcagctctgggtgcccgaaggcttcgcgcacggttat
tgtacgctgaccgacggcgcggaggtgatctacaaggtgacgggctattacgacgcgcag
gccgagcggggcgtccgcttcgacgacccggcgctgggcatcgactggcccgtcgagccg
gcggcggcgatcctgtcggagaaggaccgcgcctggccggacctcgccggcttcggcggg
gtgtga
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